Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AC103810.6-201ENST00000606708 136 ntBASIC3.26□□□□□ -1.89
PCDH11YQ9BZA8 AC135507.1-201ENST00000607214 561 ntBASIC3.26□□□□□ -1.89
PCDH11YQ9BZA8 AC009090.3-201ENST00000616553 565 ntBASIC3.26□□□□□ -1.89
PCDH11YQ9BZA8 MIR4275-201ENST00000636486 87 ntBASIC3.26□□□□□ -1.89
PCDH11YQ9BZA8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH11YQ9BZA8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH11YQ9BZA8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PCDH11YQ9BZA8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH11YQ9BZA8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC009812.4-201ENST00000569134 1805 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 RNY3P10-201ENST00000384764 102 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC078974.1-201ENST00000411597 223 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC090774.1-201ENST00000435925 246 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 USP9YP12-201ENST00000450481 570 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC055855.1-201ENST00000489563 579 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 MTCO2P32-201ENST00000514865 403 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 SNORA31.8-201ENST00000516327 108 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 Y_RNA.695-201ENST00000516715 107 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 RNA5SP468-201ENST00000516782 93 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 RNU6-798P-201ENST00000516912 103 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 KC877982.1-201ENST00000602313 470 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AL359999.1-201ENST00000604513 294 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC080013.6-201ENST00000606185 215 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC025594.3-201ENST00000613068 790 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC104010.1-201ENST00000616889 150 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC048344.4-201ENST00000619744 527 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AC012150.2-201ENST00000621300 544 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AP003399.1-201ENST00000637534 361 ntBASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH11YQ9BZA8 AL138713.1-201ENST00000624026 2130 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 FGF7P2-201ENST00000332473 296 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 RNU6-50P-201ENST00000362356 103 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AP000567.1-201ENST00000406413 156 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 Y_RNA.608-201ENST00000410647 95 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 BX276092.3-201ENST00000424182 230 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AL353777.1-201ENST00000425552 326 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AL356583.2-201ENST00000426536 280 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 MTATP6P4-201ENST00000427725 675 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC024082.2-201ENST00000434771 238 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 HMGB1P12-201ENST00000438594 598 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 HMGB3P12-201ENST00000438745 556 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 TPT1P14-201ENST00000448018 505 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC091965.2-201ENST00000512324 613 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC022878.1-201ENST00000530684 149 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC125611.2-201ENST00000551907 647 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC012414.6-201ENST00000568241 401 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 MIR4769-201ENST00000584126 77 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC004908.2-201ENST00000609090 574 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC138749.5-201ENST00000611461 208 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC093783.1-201ENST00000612976 329 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC116165.2-201ENST00000616705 206 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC009878.1-201ENST00000621819 340 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC112204.3-201ENST00000623822 332 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AL159972.1-201ENST00000625150 448 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC010733.2-201ENST00000589496 5702 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 DDX10P1-201ENST00000448545 1933 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 AC005832.2-201ENST00000538921 1430 ntBASIC3.24□□□□□ -1.89
PCDH11YQ9BZA8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 RNU6-223P-201ENST00000362830 107 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 SNORA51.4-201ENST00000364993 124 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 RNU6-432P-201ENST00000384196 109 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 MIR19A-201ENST00000384878 82 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 RNA5SP129-201ENST00000410276 118 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 RNU4-65P-201ENST00000410473 140 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 Y_RNA.598-201ENST00000410480 95 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 RN7SKP142-201ENST00000411236 328 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH11YQ9BZA8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms