Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 RNY4P36-201ENST00000391116 96 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 MIR1302-11-201ENST00000408051 138 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 MIR1302-9-201ENST00000408365 138 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 U3.37-201ENST00000408528 213 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 MIR1302-10-201ENST00000408734 138 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 ATG3P1-201ENST00000419507 911 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 EIF4HP2-201ENST00000424380 563 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 SKA2P1-201ENST00000425592 390 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 C4BPAP2-201ENST00000428434 478 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 RPS23P7-201ENST00000466210 444 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 RN7SL385P-201ENST00000468873 276 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 AC025164.1-201ENST00000496249 478 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 RNU6-377P-201ENST00000515965 102 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 Y_RNA.687-201ENST00000516558 91 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 Y_RNA.708-201ENST00000516950 96 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 MTND4LP5-201ENST00000605152 292 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 MIR1302-2-201ENST00000607096 138 ntBASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAIPQ9BWF2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AC007656.2-201ENST00000624902 4547 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AC068538.1-201ENST00000376856 336 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 XGY1-201ENST00000381172 446 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 RNU1-82P-201ENST00000390851 165 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 SDHCP2-201ENST00000398565 501 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 RNU4-14P-201ENST00000410858 122 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 SNORD56-201ENST00000413522 71 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 MTCO2P12-201ENST00000427426 682 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AC097713.2-201ENST00000430199 356 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 TPT1P12-201ENST00000448968 492 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 RPL23AP45-201ENST00000476406 468 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AP004607.1-201ENST00000524456 203 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AP000827.1-201ENST00000527814 258 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AL442663.2-201ENST00000554385 511 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AL161423.1-201ENST00000613700 262 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AL157817.1-201ENST00000614264 790 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AL161629.2-201ENST00000615347 275 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AC090971.5-201ENST00000621102 293 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 AL359922.3-201ENST00000624779 1670 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 ADAM3A-203ENST00000461344 2157 ntBASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAIPQ9BWF2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 RNU6-72P-201ENST00000384285 79 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 RNU6-954P-201ENST00000411355 107 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 RPEP3-201ENST00000425462 676 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 RPL30P15-201ENST00000457129 321 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 AK3P2-201ENST00000507976 429 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 RNA5SP464-201ENST00000516251 108 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 APOOP3-201ENST00000536787 586 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 AC107016.1-201ENST00000550463 337 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 CYCSP39-201ENST00000565821 309 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 AC064836.2-201ENST00000609491 462 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 AC004852.3-201ENST00000614131 326 ntBASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRAIPQ9BWF2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms