Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC090971.5-201ENST00000621102 293 ntBASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRFN3Q9BTN0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AC008568.2-201ENST00000623862 2313 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 OR4G1P-203ENST00000641984 1631 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU6-254P-201ENST00000363377 107 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU6-188P-201ENST00000364207 107 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.315-201ENST00000365117 102 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU6-946P-201ENST00000383878 107 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU1-63P-201ENST00000383902 164 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU6-474P-201ENST00000384243 107 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AC009161.1-201ENST00000417306 376 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 OOSP1P1-201ENST00000423265 274 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 EIF4HP2-201ENST00000424380 563 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 MTND3P2-201ENST00000438452 342 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 HMGB1P12-201ENST00000438594 598 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 HMGB1P18-201ENST00000438801 619 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 FGF7P3-201ENST00000454645 303 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RPL38P4-201ENST00000502376 214 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU6-237P-201ENST00000515985 71 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU4-49P-201ENST00000516080 140 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU6-677P-201ENST00000516914 101 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNA5SP503-201ENST00000517047 117 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 RNU6-1314P-201ENST00000517139 104 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 SUB1P1-201ENST00000524415 382 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AP001804.3-201ENST00000525146 880 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AC091516.1-201ENST00000549191 703 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AC106900.2-201ENST00000604994 317 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AC104237.2-201ENST00000612456 443 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AC040896.1-201ENST00000613819 479 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AC025034.2-201ENST00000623264 286 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AC006020.1-201ENST00000420179 1854 ntBASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LRFN3Q9BTN0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AL672296.1-201ENST00000427780 2158 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 FTLP6-201ENST00000355274 422 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.128-201ENST00000363391 112 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.144-201ENST00000363521 113 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.255-201ENST00000364581 97 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RNA5SP51-201ENST00000364750 119 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RNU6-996P-201ENST00000365438 107 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.387-201ENST00000383918 102 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RNU6-1160P-201ENST00000384546 104 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 MIR559-201ENST00000385188 96 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.579-201ENST00000390939 94 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RNU2-29P-201ENST00000410423 189 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 NDUFB4P5-201ENST00000415445 361 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 MTCYBP8-201ENST00000422855 651 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RNU6-329P-201ENST00000459618 107 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RPL21P10-201ENST00000463521 490 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC008155.2-201ENST00000464337 397 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 KC877373.1-201ENST00000479066 408 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AL163973.1-201ENST00000484753 577 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AL049874.1-201ENST00000489560 388 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC026784.1-201ENST00000507986 352 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RNA5SP249-201ENST00000516127 99 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RNU6-927P-201ENST00000516199 100 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 SCARNA14-201ENST00000516903 136 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 RNA5SP179-201ENST00000517284 121 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 IGKV2-38-201ENST00000517443 247 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 AP006587.4-201ENST00000526053 529 ntBASIC4.03□□□□□ -1.76
LRFN3Q9BTN0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms