Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.96□□□□□ -1.94
CPNE1Q99829 AC104850.1-201ENST00000435940 476 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 RPS24P1-201ENST00000438550 371 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 ELOCP7-201ENST00000439968 331 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 KATNBL1P3-201ENST00000443475 909 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 RNU6-953P-201ENST00000459154 107 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 FAM133DP-201ENST00000464802 691 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CPNE1Q99829 AC117440.1-201ENST00000474107 571 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AC138853.1-201ENST00000503549 823 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 RN7SKP272-201ENST00000516988 232 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.96□□□□□ -1.94
CPNE1Q99829 AP005136.1-201ENST00000579765 429 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.96□□□□□ -1.94
CPNE1Q99829 AC119751.7-201ENST00000600494 245 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AC104763.2-201ENST00000604179 382 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AL161798.1-201ENST00000604630 131 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AC007363.1-201ENST00000604736 620 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 RN7SKP299-201ENST00000606679 301 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AP002360.4-201ENST00000606980 481 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AC109347.2-201ENST00000610220 349 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 FTX_3.1-201ENST00000610451 147 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AC010338.1-201ENST00000621823 717 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 AC090582.1-201ENST00000636321 199 ntBASIC2.96□□□□□ -1.94
CPNE1Q99829 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.96□□□□□ -1.94
CPNE1Q99829 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CPNE1Q99829 CR848007.1-201ENST00000442354 1699 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CPNE1Q99829 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.95□□□□□ -1.94
CPNE1Q99829 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CPNE1Q99829 FTLP6-201ENST00000355274 422 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 SNORA63.1-201ENST00000362493 131 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 SMIM11P1-201ENST00000369586 178 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 RNU6-14P-201ENST00000384630 106 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CPNE1Q99829 RN7SKP220-201ENST00000410611 288 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.95□□□□□ -1.94
CPNE1Q99829 ISCA1P6-201ENST00000427740 390 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.95□□□□□ -1.94
CPNE1Q99829 ARPC3P1-201ENST00000437218 533 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.95□□□□□ -1.94
CPNE1Q99829 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.95□□□□□ -1.94
CPNE1Q99829 AC244505.5-201ENST00000443639 207 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 DDX3P2-201ENST00000446138 111 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 PRDX3P3-201ENST00000447765 522 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.95□□□□□ -1.94
CPNE1Q99829 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.95□□□□□ -1.94
CPNE1Q99829 AC104472.2-201ENST00000469035 601 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.95□□□□□ -1.94
CPNE1Q99829 AC105313.1-201ENST00000509121 353 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.95□□□□□ -1.94
CPNE1Q99829 AC117522.2-201ENST00000510049 657 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 RNA5SP471-201ENST00000516971 106 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 HMGB1P41-201ENST00000520234 440 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AC022616.3-201ENST00000523940 148 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.95□□□□□ -1.94
CPNE1Q99829 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.95□□□□□ -1.94
CPNE1Q99829 AC068135.2-201ENST00000569293 1028 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 MIR4506-201ENST00000584693 77 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 RSL24D1P11-201ENST00000591045 491 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AL133393.1-201ENST00000603277 287 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AL358072.1-201ENST00000604156 575 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AC064872.1-201ENST00000604823 1072 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AL020991.1-201ENST00000612314 373 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AL365204.3-201ENST00000612448 685 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 MIR7112-201ENST00000616126 65 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 AC006133.1-201ENST00000617106 264 ntBASIC2.95□□□□□ -1.94
CPNE1Q99829 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.95□□□□□ -1.94
CPNE1Q99829 AC103988.1-201ENST00000566382 2177 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 RNU1-35P-201ENST00000362782 153 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 SNORA54-201ENST00000384281 123 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CPNE1Q99829 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.94□□□□□ -1.94
CPNE1Q99829 RNU6-195P-201ENST00000411352 109 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 C1DP2-201ENST00000418167 426 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.94□□□□□ -1.94
CPNE1Q99829 MTCO2P34-201ENST00000421994 607 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.94□□□□□ -1.94
CPNE1Q99829 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.94□□□□□ -1.94
CPNE1Q99829 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.94□□□□□ -1.94
CPNE1Q99829 MTCO1P19-201ENST00000443487 500 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.94□□□□□ -1.94
CPNE1Q99829 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.94□□□□□ -1.94
CPNE1Q99829 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.94□□□□□ -1.94
CPNE1Q99829 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.94□□□□□ -1.94
CPNE1Q99829 MTND4LP3-201ENST00000468320 276 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 RN7SL601P-201ENST00000471221 293 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 ARL4AP2-201ENST00000507378 601 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 MTND4P2-201ENST00000507767 1203 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.94□□□□□ -1.94
CPNE1Q99829 SNORA67.7-201ENST00000516664 135 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 AC087883.1-201ENST00000551882 391 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 DNAJC8P1-201ENST00000554535 372 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.94□□□□□ -1.94
CPNE1Q99829 MIR3167-201ENST00000579623 85 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 AC174048.1-201ENST00000603389 144 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 AC015871.2-201ENST00000603605 948 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 AC245014.2-201ENST00000603689 287 ntBASIC2.94□□□□□ -1.94
CPNE1Q99829 AC246785.4-201ENST00000605374 287 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms