Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.43□□□□□ -1.86
NPAS1Q99742 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.43□□□□□ -1.86
NPAS1Q99742 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.43□□□□□ -1.86
NPAS1Q99742 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS1Q99742 AC009033.1-201ENST00000624279 431 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.43□□□□□ -1.86
NPAS1Q99742 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.43□□□□□ -1.86
NPAS1Q99742 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS1Q99742 TPTE2P4-201ENST00000258589 1605 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.42□□□□□ -1.86
NPAS1Q99742 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NPAS1Q99742 AC007256.1-201ENST00000392253 2765 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.42□□□□□ -1.86
NPAS1Q99742 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.42□□□□□ -1.86
NPAS1Q99742 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.42□□□□□ -1.86
NPAS1Q99742 RNU4-66P-201ENST00000365199 138 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NPAS1Q99742 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NPAS1Q99742 RNU6-550P-201ENST00000391057 101 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AL354719.1-201ENST00000406535 843 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 RNU4-46P-201ENST00000410818 138 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.42□□□□□ -1.86
NPAS1Q99742 AL139413.1-201ENST00000421309 217 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 NDUFB4P6-201ENST00000436819 366 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 RBMX2P4-201ENST00000441256 376 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPAS1Q99742 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.42□□□□□ -1.86
NPAS1Q99742 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.42□□□□□ -1.86
NPAS1Q99742 AC025465.4-201ENST00000513422 638 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 SNORD60.2-201ENST00000516883 86 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.42□□□□□ -1.86
NPAS1Q99742 MTND4P7-201ENST00000523876 130 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 CYCSP30-201ENST00000546447 172 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 ZNF192P1-203ENST00000565888 810 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AL137849.1-201ENST00000604767 169 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.42□□□□□ -1.86
NPAS1Q99742 RNVU1-4-201ENST00000612985 164 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AL121772.2-201ENST00000614331 297 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AL110115.1-201ENST00000614396 364 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AC010338.1-201ENST00000621823 717 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.42□□□□□ -1.86
NPAS1Q99742 Z99571.1-201ENST00000636677 394 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AC024614.3-201ENST00000637860 256 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NPAS1Q99742 AP001148.1-201ENST00000624124 2359 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.42□□□□□ -1.86
NPAS1Q99742 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 AC007785.2-201ENST00000598627 1916 ntBASIC3.42□□□□□ -1.86
NPAS1Q99742 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPAS1Q99742 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPAS1Q99742 AL133383.2-201ENST00000622958 2336 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 RPL7P26-201ENST00000333817 754 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NPAS1Q99742 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPAS1Q99742 MTHFD2P2-201ENST00000407725 247 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 SNRPEP10-201ENST00000420249 274 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 RPL17P36-201ENST00000420302 549 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 UBE2D3P2-201ENST00000424409 445 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AL591419.1-201ENST00000427423 339 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AL512844.2-201ENST00000433990 593 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 CALM1P1-201ENST00000442082 433 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 MTCO2P3-201ENST00000442543 421 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.41□□□□□ -1.86
NPAS1Q99742 MTND4P18-201ENST00000447010 465 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AL500522.2-201ENST00000448562 343 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 RN7SL542P-201ENST00000467147 294 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 RN7SL132P-201ENST00000478131 296 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AC069439.1-201ENST00000494739 167 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 FCF1P3-201ENST00000496394 590 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AC116353.2-201ENST00000505332 712 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.41□□□□□ -1.86
NPAS1Q99742 AC117522.3-201ENST00000507974 584 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 APOOP4-201ENST00000513530 597 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 RNU6-914P-201ENST00000516749 109 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 SUMO2P20-201ENST00000520803 283 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AC008011.1-201ENST00000545989 227 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.41□□□□□ -1.86
NPAS1Q99742 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPAS1Q99742 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.41□□□□□ -1.86
NPAS1Q99742 AC006130.2-201ENST00000586202 326 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.41□□□□□ -1.86
NPAS1Q99742 AC010525.2-201ENST00000590920 195 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 RNU1-30P-201ENST00000606575 163 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 MIR15A-201ENST00000607334 83 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.41□□□□□ -1.86
NPAS1Q99742 RMST_8.1-201ENST00000610287 165 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 MIR8058-201ENST00000615737 89 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPAS1Q99742 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPAS1Q99742 AC006504.1-201ENST00000562493 3666 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 OR4G1P-203ENST00000641984 1631 ntBASIC3.41□□□□□ -1.86
NPAS1Q99742 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NPAS1Q99742 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
NPAS1Q99742 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
NPAS1Q99742 CUL1P1-201ENST00000509510 2425 ntBASIC3.4□□□□□ -1.86
NPAS1Q99742 AC103710.2-202ENST00000641454 2853 ntBASIC3.4□□□□□ -1.86
NPAS1Q99742 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
NPAS1Q99742 RNU6-1283P-201ENST00000365314 105 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms