Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 Y_RNA.142-201ENST00000363491 102 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 Y_RNA.154-201ENST00000363624 102 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 RNY4P16-201ENST00000364768 94 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 RNY3P1-201ENST00000365085 102 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 RNY3-201ENST00000365484 102 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 XGY1-201ENST00000381172 446 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 RNU6-116P-201ENST00000384042 109 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 Y_RNA.490-201ENST00000384413 102 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 RNU6-456P-201ENST00000384493 107 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 RNU6-1068P-201ENST00000410958 103 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AL606489.2-201ENST00000433886 234 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 HMGB3P12-201ENST00000438745 556 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AL138799.3-201ENST00000438968 350 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.54□□□□□ -1.84
MEIS3Q99687 BNIP3P2-201ENST00000441221 577 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 USP9YP15-201ENST00000442391 422 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC025750.2-201ENST00000442609 450 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.54□□□□□ -1.84
MEIS3Q99687 RPL23AP20-201ENST00000447965 421 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 HMGN3P1-201ENST00000453847 193 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 RPS20P20-201ENST00000460498 340 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC003982.1-202ENST00000469928 248 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC010587.1-201ENST00000505809 469 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC093677.1-201ENST00000514414 678 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 RN7SKP132-201ENST00000516001 208 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.54□□□□□ -1.84
MEIS3Q99687 AC022861.1-201ENST00000522981 663 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.54□□□□□ -1.84
MEIS3Q99687 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.54□□□□□ -1.84
MEIS3Q99687 AC107016.2-201ENST00000547968 190 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 ARL2BPP2-201ENST00000550907 489 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.54□□□□□ -1.84
MEIS3Q99687 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.54□□□□□ -1.84
MEIS3Q99687 NF1P5-201ENST00000588287 448 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC025449.1-201ENST00000603896 529 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC090115.4-201ENST00000609970 188 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 YWHAEP7-203ENST00000622054 312 ntBASIC3.54□□□□□ -1.84
MEIS3Q99687 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
MEIS3Q99687 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
MEIS3Q99687 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MEIS3Q99687 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
MEIS3Q99687 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.54□□□□□ -1.84
MEIS3Q99687 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MEIS3Q99687 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MEIS3Q99687 RNU6-451P-201ENST00000362921 107 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 RNU4-1-201ENST00000363925 141 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 Y_RNA.548-201ENST00000384656 105 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 RPL23AP32-201ENST00000395315 459 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AL591416.1-201ENST00000404015 867 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 PDCL2P1-201ENST00000419302 352 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AC092832.1-201ENST00000422934 400 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AL138785.1-201ENST00000425821 331 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.53□□□□□ -1.84
MEIS3Q99687 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.53□□□□□ -1.84
MEIS3Q99687 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.53□□□□□ -1.84
MEIS3Q99687 ARPC3P5-201ENST00000448802 534 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.53□□□□□ -1.84
MEIS3Q99687 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.53□□□□□ -1.84
MEIS3Q99687 AC023194.1-201ENST00000493084 308 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.53□□□□□ -1.84
MEIS3Q99687 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.53□□□□□ -1.84
MEIS3Q99687 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.53□□□□□ -1.84
MEIS3Q99687 Vault.3-201ENST00000516676 95 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AC106782.4-201ENST00000568264 210 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 MIR4504-201ENST00000577413 92 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.53□□□□□ -1.84
MEIS3Q99687 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.53□□□□□ -1.84
MEIS3Q99687 AC005261.5-201ENST00000596280 355 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AL162413.1-201ENST00000603198 110 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.53□□□□□ -1.84
MEIS3Q99687 AP003122.6-201ENST00000623831 495 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AC079597.1-201ENST00000624306 508 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MEIS3Q99687 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
MEIS3Q99687 AC007390.2-201ENST00000606229 3803 ntBASIC3.53□□□□□ -1.84
MEIS3Q99687 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
MEIS3Q99687 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MEIS3Q99687 RNY3P3-201ENST00000363816 102 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 SNORA80A-201ENST00000363922 136 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 RNU6-730P-201ENST00000383954 104 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 Y_RNA.419-201ENST00000384041 102 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 MT-TD-201ENST00000387419 68 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 MRPL42P2-201ENST00000403169 426 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AL356057.2-201ENST00000403318 432 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 BTBD10P2-201ENST00000404779 676 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AL023807.1-201ENST00000407932 359 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AL645937.1-202ENST00000421799 937 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.52□□□□□ -1.85
MEIS3Q99687 AL513185.2-201ENST00000425543 193 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 TAAR7P-201ENST00000436141 242 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AC097462.2-201ENST00000504623 481 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.52□□□□□ -1.85
MEIS3Q99687 RNA5SP401-201ENST00000515920 127 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 Y_RNA.701-201ENST00000516812 110 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 RNU6-835P-201ENST00000516974 104 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AC022790.1-201ENST00000522872 204 ntBASIC3.52□□□□□ -1.85
MEIS3Q99687 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms