Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDK5RAP1Q96SZ6 AC032011.1-201ENST00000611703 1549 ntBASIC4.21□□□□□ -1.73
CDK5RAP1Q96SZ6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AC091812.1-201ENST00000432235 1948 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 Y_RNA.252-201ENST00000364556 101 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AL445189.1-201ENST00000405722 338 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 POLHP1-201ENST00000411806 470 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 RPL17P36-201ENST00000420302 549 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AL590632.1-201ENST00000424289 371 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AC093151.1-201ENST00000427711 313 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 RPL7P28-201ENST00000437739 740 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 RPL21P2-201ENST00000440049 481 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AC093156.1-201ENST00000440382 670 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AL606490.9-201ENST00000603331 271 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AC009229.3-201ENST00000608056 282 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 MIR6128-201ENST00000615528 109 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 AC099669.2-201ENST00000616549 437 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 MIR4727-201ENST00000622232 55 ntBASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.21□□□□□ -1.74
CDK5RAP1Q96SZ6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC121333.1-201ENST00000567488 2709 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AL157777.2-201ENST00000258070 137 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU6-97P-201ENST00000363387 104 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU5A-8P-201ENST00000364102 114 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU1-64P-201ENST00000365443 163 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 Y_RNA.389-201ENST00000383924 113 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 U3.20-201ENST00000390909 217 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU6-1109P-201ENST00000391187 107 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 NDUFS5P1-201ENST00000405668 289 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AL133384.1-201ENST00000412744 351 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 MED13P1-201ENST00000428342 171 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 HMGB1P9-201ENST00000429856 646 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AF228730.2-201ENST00000438784 848 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 RAC1P7-201ENST00000445367 377 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC104472.2-201ENST00000469035 601 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 SLC25A15P5-201ENST00000508033 253 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC008526.1-201ENST00000509149 338 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 Y_RNA.670-201ENST00000516255 105 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC005255.1-201ENST00000593748 216 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 ATP1B3P1-201ENST00000605365 821 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 PRR13P7-201ENST00000605538 430 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC133104.2-201ENST00000615272 193 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 PLCE1P1-201ENST00000622094 305 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 MIR6500-201ENST00000622700 86 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC011460.1-201ENST00000636268 1834 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 AC008725.1-201ENST00000605123 2263 ntBASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDK5RAP1Q96SZ6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 U3.11-201ENST00000364476 212 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 AL391219.1-201ENST00000422570 483 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 AL031736.2-201ENST00000426573 787 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 OR2AS1P-201ENST00000427827 319 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 HLA-N-201ENST00000437516 135 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 RPL7P52-201ENST00000449200 742 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 AC015911.1-201ENST00000495111 156 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 RPL30P11-201ENST00000495304 339 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 AC146944.2-203ENST00000502493 354 ntBASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CDK5RAP1Q96SZ6 HIGD1AP13-201ENST00000509878 289 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms