Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 GLYCAM1-201ENST00000546596 285 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC022662.1-201ENST00000580252 331 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 BNIP3P27-201ENST00000599991 412 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 BNIP3P39-201ENST00000601077 554 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AL357094.1-201ENST00000603845 844 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AL139344.1-201ENST00000605228 195 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC103810.6-201ENST00000606708 136 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 RNU6-88P-201ENST00000606801 100 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC144521.1-201ENST00000607148 956 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC135507.1-201ENST00000607214 561 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC024933.1-201ENST00000608472 348 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC131235.4-201ENST00000609288 620 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL21A1Q96P44 AC107075.1-201ENST00000613695 314 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.19□□□□□ -2.06
COL21A1Q96P44 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.19□□□□□ -2.06
COL21A1Q96P44 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL21A1Q96P44 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 RNU4-92P-201ENST00000363783 136 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC007919.1-201ENST00000429380 217 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 HMGB1P9-201ENST00000429856 646 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 GTF2IP20-201ENST00000431663 360 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 COX7BP2-201ENST00000437976 242 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 MTCO3P45-201ENST00000443036 613 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 DDX3P2-201ENST00000446138 111 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC011753.1-201ENST00000451001 220 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 MRPS17P3-201ENST00000465453 385 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC116353.3-201ENST00000511215 249 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC022447.1-201ENST00000515358 464 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC105137.2-201ENST00000569073 466 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC005951.2-201ENST00000576282 495 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 AL596327.1-201ENST00000603629 213 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 AC116618.1-201ENST00000634617 774 ntBASIC2.18□□□□□ -2.06
COL21A1Q96P44 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL21A1Q96P44 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
COL21A1Q96P44 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 MTND4P9-201ENST00000507819 1346 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 AL139276.1-201ENST00000311910 1001 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 FAM133CP-201ENST00000332869 704 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 SET-203ENST00000372688 801 ntTSL 2 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AL354692.1-201ENST00000423044 315 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 Z80107.1-201ENST00000436830 412 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 RPL26P9-201ENST00000457466 433 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC093809.1-201ENST00000509155 340 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 RNU6-927P-201ENST00000516199 100 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 COX6CP5-201ENST00000527162 228 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 NACAP3-201ENST00000552100 481 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 AL139022.2-201ENST00000606934 443 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC004908.2-201ENST00000609090 574 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC022306.3-201ENST00000619930 550 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 AC010329.5-201ENST00000623497 2174 ntBASIC2.17□□□□□ -2.06
COL21A1Q96P44 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL21A1Q96P44 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL21A1Q96P44 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL21A1Q96P44 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.17□□□□□ -2.06
COL21A1Q96P44 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL21A1Q96P44 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms