Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RITA1Q96K30 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.35□□□□□ -1.87
RITA1Q96K30 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
RITA1Q96K30 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 Y_RNA.31-201ENST00000362574 102 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 RNA5SP388-201ENST00000362584 119 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 SNORD3E-201ENST00000362899 217 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 Y_RNA.112-201ENST00000363250 102 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 RNU6-214P-201ENST00000384130 107 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 RNU6-95P-201ENST00000384697 107 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 MIR578-201ENST00000384828 96 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 MIR708-201ENST00000390708 88 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 Y_RNA.646-201ENST00000410980 101 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC063979.1-201ENST00000415539 377 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AL592045.1-201ENST00000429867 352 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 COX6B1P7-201ENST00000430845 235 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.35□□□□□ -1.87
RITA1Q96K30 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.35□□□□□ -1.87
RITA1Q96K30 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC105137.1-201ENST00000484355 562 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.35□□□□□ -1.87
RITA1Q96K30 SUMO2P6-201ENST00000505273 288 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AL592156.1-201ENST00000508758 304 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.35□□□□□ -1.87
RITA1Q96K30 SMURF2P1-201ENST00000514992 481 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 RNA5SP471-201ENST00000516971 106 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 RNU1-54P-201ENST00000517181 120 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 IGKV2D-23-201ENST00000518179 286 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.35□□□□□ -1.87
RITA1Q96K30 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC025423.5-201ENST00000550230 219 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AC026371.1-201ENST00000551867 419 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AC063950.1-201ENST00000552036 308 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 MED28P6-201ENST00000558776 231 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.35□□□□□ -1.87
RITA1Q96K30 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC022655.2-201ENST00000577280 318 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AC100830.2-201ENST00000581636 240 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.35□□□□□ -1.87
RITA1Q96K30 AL512643.1-201ENST00000635735 524 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 AC016588.2-201ENST00000632484 3021 ntBASIC3.35□□□□□ -1.87
RITA1Q96K30 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RITA1Q96K30 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RITA1Q96K30 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RITA1Q96K30 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.34□□□□□ -1.87
RITA1Q96K30 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RITA1Q96K30 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RITA1Q96K30 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
RITA1Q96K30 RNA5SP502-201ENST00000362694 119 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 Y_RNA.145-201ENST00000363527 102 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RITA1Q96K30 SNORA22B-201ENST00000383876 138 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 RNU6-639P-201ENST00000384074 107 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 RNU6-308P-201ENST00000390957 107 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 EI24P1-201ENST00000416584 867 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.34□□□□□ -1.87
RITA1Q96K30 TXNP1-201ENST00000441872 371 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 HMGN2P21-201ENST00000447764 270 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.34□□□□□ -1.87
RITA1Q96K30 RPL23AP31-201ENST00000456160 467 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.34□□□□□ -1.87
RITA1Q96K30 RNU7-138P-201ENST00000459479 64 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 RN7SL585P-201ENST00000470538 280 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
RITA1Q96K30 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.34□□□□□ -1.87
RITA1Q96K30 RPS15AP34-201ENST00000487776 387 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 MTND3P25-201ENST00000509243 135 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 AC096745.1-201ENST00000509945 370 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 SCARNA15.2-201ENST00000516409 127 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 Y_RNA.708-201ENST00000516950 96 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 AC069113.1-201ENST00000517763 267 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.34□□□□□ -1.87
RITA1Q96K30 IFITM8P-201ENST00000522529 394 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 MIR3921-201ENST00000577308 85 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 LRRC37A5P-203ENST00000580181 585 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 AC098826.3-201ENST00000603823 466 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 AP000942.4-201ENST00000604811 241 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 AP000654.2-201ENST00000605633 586 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 MIR3653-201ENST00000625572 110 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 Z99571.1-201ENST00000636677 394 ntBASIC3.34□□□□□ -1.87
RITA1Q96K30 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RITA1Q96K30 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RITA1Q96K30 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
RITA1Q96K30 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RITA1Q96K30 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RITA1Q96K30 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms