Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC114786.4-201ENST00000508771 728 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC008549.1-201ENST00000512900 643 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC114781.4-201ENST00000513707 639 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RN7SKP83-201ENST00000516512 178 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RNA5SP503-201ENST00000517047 117 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 IGHV3-76-201ENST00000522465 295 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 CENPUP1-201ENST00000526649 1202 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 MIR4703-201ENST00000577728 79 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 SNORD84-203ENST00000584275 78 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC091167.4-201ENST00000605079 184 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 LARP7P1-201ENST00000605576 316 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 SDR42E1P2-201ENST00000614861 481 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC104260.1-201ENST00000616660 539 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC006504.8-201ENST00000621046 635 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AL360181.4-201ENST00000621752 134 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC092326.2-201ENST00000624772 1561 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 AC002546.1-201ENST00000588041 2504 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 API5P2-201ENST00000397055 1498 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 RNU6-332P-201ENST00000391193 108 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 RNA5SP129-201ENST00000410276 118 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 RPL21P109-201ENST00000422213 475 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AC008850.1-201ENST00000427546 362 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 CALM1P1-201ENST00000442082 433 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL133547.1-201ENST00000448546 220 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AC006539.3-201ENST00000454258 129 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 HMGN1P12-201ENST00000499125 195 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 VN1R104P-201ENST00000505115 1009 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 PHBP14-201ENST00000512887 367 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 GMPSP1-201ENST00000514075 579 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 RNA5SP468-201ENST00000516782 93 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS50Q96JG6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 AC015917.1-201ENST00000579654 510 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AC067852.3-201ENST00000589177 561 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL670379.6-201ENST00000603753 252 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL670379.11-201ENST00000604059 253 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AC008162.1-201ENST00000604718 254 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL670379.1-201ENST00000604752 252 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL670379.5-201ENST00000605253 252 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL670379.12-201ENST00000605291 253 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL670379.8-201ENST00000605353 252 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 BNIP3P10-201ENST00000605360 577 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 AL670379.7-201ENST00000605823 252 ntBASIC3.69□□□□□ -1.82
VPS50Q96JG6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS50Q96JG6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS50Q96JG6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS50Q96JG6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
VPS50Q96JG6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
VPS50Q96JG6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS50Q96JG6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS50Q96JG6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
VPS50Q96JG6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS50Q96JG6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS50Q96JG6 RN7SKP156-201ENST00000410308 342 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 AC092809.3-201ENST00000415453 231 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 AC018644.1-201ENST00000429934 551 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 HMGN2P20-201ENST00000437531 273 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 AC020550.1-201ENST00000447385 163 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 MTND3P16-201ENST00000452205 344 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 HSPE1P6-201ENST00000479457 291 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 AL049874.1-201ENST00000489560 388 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 RNU6-875P-201ENST00000516488 106 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 SNORD60.2-201ENST00000516883 86 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 MED28P6-201ENST00000558776 231 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 RPL23AP84-201ENST00000571193 464 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 MIR5583-1-201ENST00000580941 59 ntBASIC3.68□□□□□ -1.82
VPS50Q96JG6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms