Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 RPS20P10-201ENST00000451209 253 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 RPL21P126-201ENST00000470049 478 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 AC140172.1-201ENST00000502928 141 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 RN7SKP277-201ENST00000516895 283 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 AC136777.2-201ENST00000522979 358 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 AC022441.3-201ENST00000605737 136 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 DNM1P47-203ENST00000571780 12667 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 AC004076.2-201ENST00000620532 3323 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 RNU1-64P-201ENST00000365443 163 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 SNORA11.1-201ENST00000408133 129 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 RN7SKP17-201ENST00000411242 351 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 RPL21P13-201ENST00000488305 481 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 BTF3L4P4-201ENST00000506381 449 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 AC093815.1-201ENST00000508637 280 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 RNU6-966P-201ENST00000516479 104 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 snoU109.6-201ENST00000516831 118 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 RNA5SP165-201ENST00000517142 115 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 MIR5695-201ENST00000579717 85 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 MIR4715-201ENST00000584117 79 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 VN1R85P-201ENST00000601587 426 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 AC073869.8-201ENST00000641806 335 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 AC009541.1-201ENST00000438279 2662 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
LRCH3Q96II8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRCH3Q96II8 AP002512.4-202ENST00000641599 4530 ntBASIC5.75□□□□□ -1.49
LRCH3Q96II8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRCH3Q96II8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRCH3Q96II8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRCH3Q96II8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 RNA5SP191-201ENST00000362585 102 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 MIR10B-201ENST00000385011 110 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 MIR329-1-201ENST00000385028 80 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 AL009179.1-201ENST00000406085 265 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 RNA5SP56-201ENST00000410277 118 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 AC087588.1-201ENST00000462203 316 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 AC020593.1-201ENST00000507399 299 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 AC100767.1-201ENST00000528178 123 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 MTND5P34-201ENST00000568888 325 ntBASIC5.74□□□□□ -1.49
LRCH3Q96II8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRCH3Q96II8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRCH3Q96II8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRCH3Q96II8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.74□□□□□ -1.49
LRCH3Q96II8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRCH3Q96II8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRCH3Q96II8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRCH3Q96II8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRCH3Q96II8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRCH3Q96II8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRCH3Q96II8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRCH3Q96II8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LRCH3Q96II8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms