Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL139811.1-201ENST00000424779 2299 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 MTND5P9-201ENST00000503854 1755 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IFT43Q96FT9 AC007685.1-201ENST00000329806 452 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 RNU6-280P-201ENST00000364145 104 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 Y_RNA.270-201ENST00000364693 104 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 AL080315.1-201ENST00000406055 466 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 RNU6-1203P-201ENST00000410703 110 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 RN7SKP216-201ENST00000411050 312 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 RPL21P38-201ENST00000418090 167 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 AL158156.1-201ENST00000422509 473 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 AL159987.2-201ENST00000432754 307 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 RPS29P9-201ENST00000440360 171 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 RPEP5-201ENST00000441137 268 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 U8.21-201ENST00000459536 136 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 AL049874.1-201ENST00000489560 388 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 AC007016.1-201ENST00000512110 244 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 SNORA31.6-201ENST00000516241 130 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 AC130289.1-201ENST00000577321 73 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 MIR4691-201ENST00000583764 85 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 AC004852.3-201ENST00000614131 326 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 AC019206.1-201ENST00000621938 425 ntBASIC5.07□□□□□ -1.6
IFT43Q96FT9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IFT43Q96FT9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IFT43Q96FT9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
IFT43Q96FT9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 ASNSP1-201ENST00000518311 1939 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AL049555.1-201ENST00000562834 1933 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 MIR412-201ENST00000362142 91 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 RN7SKP95-201ENST00000362860 303 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 Y_RNA.105-201ENST00000363182 111 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 RNU6-384P-201ENST00000364900 104 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 Y_RNA.539-201ENST00000384635 107 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 Y_RNA.592-201ENST00000410274 109 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 RNU6-1025P-201ENST00000410629 104 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 SNORD56-201ENST00000413522 71 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 MYL8P-204ENST00000431574 518 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 RPL35AP21-201ENST00000437667 333 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 AL691482.1-201ENST00000453255 87 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 AC140172.1-201ENST00000502928 141 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AC108145.1-201ENST00000503770 153 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 AC009314.1-201ENST00000603871 304 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 MIR8076-201ENST00000611401 83 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AC004792.1-201ENST00000614523 137 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AP001282.2-201ENST00000616149 309 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AL591926.8-201ENST00000616876 211 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 AC091903.1-201ENST00000624322 454 ntBASIC5.06□□□□□ -1.6
IFT43Q96FT9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IFT43Q96FT9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
IFT43Q96FT9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IFT43Q96FT9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
IFT43Q96FT9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 AL365440.1-201ENST00000436135 2167 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
IFT43Q96FT9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 AC000123.3-201ENST00000624029 4975 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 AL391987.6-201ENST00000305671 199 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 Y_RNA.84-201ENST00000363011 104 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 SNORA73.1-201ENST00000363107 205 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 RNU6-827P-201ENST00000365553 106 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 RNU6-746P-201ENST00000384112 109 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 MIR514A1-201ENST00000385133 98 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 SNORA68.2-201ENST00000391263 128 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 RNU6-121P-201ENST00000410525 99 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 Y_RNA.625-201ENST00000411256 107 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 AL592148.1-201ENST00000413568 445 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 AC079780.1-201ENST00000428259 207 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 AL450023.3-201ENST00000440592 271 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 RPL34P20-201ENST00000442771 351 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 RPL7AP61-201ENST00000443410 636 ntBASIC5.05□□□□□ -1.6
IFT43Q96FT9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.05□□□□□ -1.6
IFT43Q96FT9 RN7SL319P-201ENST00000480656 221 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms