Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC104237.2-201ENST00000612456 443 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC025594.3-201ENST00000613068 790 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC091953.2-201ENST00000623979 160 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AL136313.1-201ENST00000624804 202 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 ZNF833P-201ENST00000424938 1494 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 MIR26A1-201ENST00000362205 77 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 RNU4-1-201ENST00000363925 141 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 SNORA9.2-201ENST00000365361 133 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 RNY3P13-201ENST00000365542 102 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 DEFA7P-201ENST00000382676 285 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 SNORD116-8-201ENST00000384365 95 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 MIR7-3-201ENST00000384898 110 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL645937.1-202ENST00000421799 937 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC019097.1-201ENST00000424783 735 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 ISCA1P1-201ENST00000426679 387 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 ELOCP14-201ENST00000428070 331 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 ELOCP7-201ENST00000439968 331 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 PGBD4P3-201ENST00000440731 581 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 TAF9P1-201ENST00000445421 515 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 ST13P20-201ENST00000447996 1065 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 TAF9P2-201ENST00000454958 515 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC138853.1-201ENST00000503549 823 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC008716.1-201ENST00000511084 513 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 RN7SKP40-201ENST00000517211 242 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AP006587.4-201ENST00000526053 529 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 HPRT1P3-201ENST00000539521 576 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC012435.1-202ENST00000568772 240 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 ROCK1P1-201ENST00000573767 549 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC008739.3-201ENST00000603262 127 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL670379.6-201ENST00000603753 252 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL670379.11-201ENST00000604059 253 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC112191.3-201ENST00000604371 277 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC008162.1-201ENST00000604718 254 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL670379.1-201ENST00000604752 252 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC245389.1-201ENST00000605141 529 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL670379.5-201ENST00000605253 252 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL670379.12-201ENST00000605291 253 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL670379.8-201ENST00000605353 252 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC105129.3-201ENST00000605455 485 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL670379.7-201ENST00000605823 252 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AL451064.1-201ENST00000607718 471 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC011890.2-201ENST00000613393 294 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC004852.3-201ENST00000614131 326 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 MIR7112-201ENST00000616126 65 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC008147.4-201ENST00000617570 1204 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AC091953.5-201ENST00000622919 233 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 AP003399.1-201ENST00000637534 361 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 OR8B1P-202ENST00000641132 1178 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 MTND5P29-201ENST00000458676 1807 ntBASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.23□□□□□ -2.05
RPUSD4Q96CM3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 FTLP6-201ENST00000355274 422 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RNA5SP72-201ENST00000364442 117 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RNU6-140P-201ENST00000384566 108 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RNU6-817P-201ENST00000391083 104 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RPS4XP7-201ENST00000406274 780 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RNA5SP120-201ENST00000410900 112 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 CYCSP46-201ENST00000423569 204 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 FCF1P1-201ENST00000432690 571 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 CR769767.1-201ENST00000436337 346 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 HMGB3P12-201ENST00000438745 556 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RPS24P13-201ENST00000442520 397 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RPL21P133-201ENST00000443666 476 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms