Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC087650.1-201ENST00000431445 468 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.66□□□□□ -1.66
BRF1Q92994 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.66□□□□□ -1.66
BRF1Q92994 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.66□□□□□ -1.66
BRF1Q92994 AC083863.1-201ENST00000438811 231 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 TXNP1-201ENST00000441872 371 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.66□□□□□ -1.66
BRF1Q92994 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.66□□□□□ -1.66
BRF1Q92994 AC104136.1-201ENST00000512969 394 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 SNORA31.3-201ENST00000516029 96 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 RNA5SP315-201ENST00000516340 116 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 Y_RNA.689-201ENST00000516589 107 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 RNU6-677P-201ENST00000516914 101 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 RN7SKP60-201ENST00000516985 239 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 RNA5SP312-201ENST00000517068 116 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.66□□□□□ -1.66
BRF1Q92994 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.66□□□□□ -1.66
BRF1Q92994 DNAJC8P1-201ENST00000554535 372 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 OR4H12P-201ENST00000556269 907 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.66□□□□□ -1.66
BRF1Q92994 AC091167.4-201ENST00000605079 184 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 AC007619.2-201ENST00000605743 379 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 RNA5SP108-201ENST00000605921 117 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.66□□□□□ -1.66
BRF1Q92994 AC010378.1-201ENST00000619270 362 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 MIR4727-201ENST00000622232 55 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRF1Q92994 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRF1Q92994 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
BRF1Q92994 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.66□□□□□ -1.66
BRF1Q92994 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
BRF1Q92994 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
BRF1Q92994 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
BRF1Q92994 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
BRF1Q92994 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.65□□□□□ -1.67
BRF1Q92994 RNU6-190P-201ENST00000384154 102 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RNU6-463P-201ENST00000384340 107 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RNU6-310P-201ENST00000384655 107 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RNU6-308P-201ENST00000390957 107 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RNU6-817P-201ENST00000391083 104 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RPL21P65-201ENST00000406094 466 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RNA5SP111-201ENST00000411386 101 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RPL7AP73-201ENST00000413490 353 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 SSXP9-201ENST00000417503 292 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AL358176.2-201ENST00000425769 204 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AL691449.1-201ENST00000426570 421 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RPL7P28-201ENST00000437739 740 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.65□□□□□ -1.67
BRF1Q92994 HMGB1P37-201ENST00000439613 609 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.65□□□□□ -1.67
BRF1Q92994 VN1R105P-201ENST00000486595 910 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AC021146.2-201ENST00000504736 556 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AC026726.1-201ENST00000512859 601 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.65□□□□□ -1.67
BRF1Q92994 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.65□□□□□ -1.67
BRF1Q92994 RNU6-1046P-201ENST00000516538 107 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RN7SKP258-201ENST00000517151 304 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 RNA5SP179-201ENST00000517284 121 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 CYCSP27-201ENST00000527643 293 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.65□□□□□ -1.67
BRF1Q92994 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.65□□□□□ -1.67
BRF1Q92994 YPEL5P3-201ENST00000547227 352 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AC091516.1-201ENST00000549191 703 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AC126177.3-201ENST00000551839 688 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 MIR4458-201ENST00000578872 75 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 AL158032.1-201ENST00000605401 106 ntBASIC4.65□□□□□ -1.67
BRF1Q92994 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
BRF1Q92994 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.65□□□□□ -1.67
BRF1Q92994 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
BRF1Q92994 HSPA8P4-201ENST00000511877 1920 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
BRF1Q92994 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.64□□□□□ -1.67
BRF1Q92994 LINC02471-203ENST00000641941 4752 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
BRF1Q92994 SNORD3E-201ENST00000362899 217 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.64□□□□□ -1.67
BRF1Q92994 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.64□□□□□ -1.67
BRF1Q92994 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.64□□□□□ -1.67
BRF1Q92994 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.64□□□□□ -1.67
BRF1Q92994 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.64□□□□□ -1.67
BRF1Q92994 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.64□□□□□ -1.67
BRF1Q92994 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.64□□□□□ -1.67
BRF1Q92994 RANP8-201ENST00000444720 713 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 AC008264.1-201ENST00000447612 367 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.64□□□□□ -1.67
BRF1Q92994 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.64□□□□□ -1.67
BRF1Q92994 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.64□□□□□ -1.67
BRF1Q92994 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 CEACAMP10-202ENST00000495431 496 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.64□□□□□ -1.67
BRF1Q92994 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.64□□□□□ -1.67
BRF1Q92994 AC116337.1-201ENST00000509680 687 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 RNU6-1016P-201ENST00000516689 94 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 Y_RNA.720-201ENST00000517166 92 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 AC087369.1-201ENST00000520775 996 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 HIGD1AP5-201ENST00000529959 259 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.64□□□□□ -1.67
BRF1Q92994 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.64□□□□□ -1.67
BRF1Q92994 SDR42E1P2-201ENST00000614861 481 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 AC022418.1-201ENST00000624118 445 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms