Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RPS27P1-201ENST00000450552 247 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AC245047.8-201ENST00000456455 284 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AL122020.1-201ENST00000472287 459 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 RNU6-772P-201ENST00000516042 105 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AC136624.4-201ENST00000573044 370 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AL391261.4-201ENST00000616012 481 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 MIR3674-201ENST00000636576 68 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 ZNF702P-202ENST00000434269 1966 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 AC239868.2-201ENST00000564237 4527 ntBASIC5.85□□□□□ -1.47
PTCD2Q8WV60 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PTCD2Q8WV60 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AL359693.1-201ENST00000614959 2407 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AC093535.2-201ENST00000624769 2326 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 RNA5SP284-201ENST00000384547 118 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 Y_RNA.572-201ENST00000384757 98 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 RNA5SP31-201ENST00000411144 127 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 RN7SKP53-201ENST00000411337 315 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AL160275.2-201ENST00000412010 394 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 MRPL53P1-201ENST00000414323 319 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 RPL30P12-201ENST00000474666 353 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 RPS29P24-201ENST00000486345 171 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 UBE2CP3-201ENST00000502715 450 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 RNA5SP291-201ENST00000517222 105 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 HSPE1P4-201ENST00000550617 308 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 MIR5571-201ENST00000577998 113 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AL670379.3-201ENST00000605040 251 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AL773545.4-201ENST00000637262 310 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AL513478.4-201ENST00000641636 310 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 AC010329.5-201ENST00000623497 2174 ntBASIC5.84□□□□□ -1.47
PTCD2Q8WV60 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD2Q8WV60 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
PTCD2Q8WV60 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.48
PTCD2Q8WV60 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTCD2Q8WV60 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
PTCD2Q8WV60 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 CYP4F29P-201ENST00000420685 446 ntBASIC5.83□□□□□ -1.48
PTCD2Q8WV60 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 RPL36AP39-201ENST00000445859 318 ntBASIC5.83□□□□□ -1.48
PTCD2Q8WV60 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 AC016632.1-201ENST00000503994 196 ntBASIC5.83□□□□□ -1.48
PTCD2Q8WV60 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 RN7SL753P-201ENST00000581238 290 ntBASIC5.83□□□□□ -1.48
PTCD2Q8WV60 AL391903.3-201ENST00000612158 163 ntBASIC5.83□□□□□ -1.48
PTCD2Q8WV60 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 AP004607.3-201ENST00000530354 3915 ntBASIC5.83□□□□□ -1.48
PTCD2Q8WV60 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD2Q8WV60 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTCD2Q8WV60 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms