Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AP004247.1-201ENST00000531556 1289 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC096772.1-201ENST00000609146 564 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC096656.1-201ENST00000623826 1364 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AL138880.1-201ENST00000405824 642 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 RN7SKP200-201ENST00000410564 320 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC244636.1-201ENST00000421152 228 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 Z85994.2-201ENST00000434327 452 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 DUXAP8-207ENST00000456786 622 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 COL6A4P2-205ENST00000509855 506 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 AC034236.3-201ENST00000605999 461 ntBASIC0.75□□□□□ -2.29
ALMS1Q8TCU4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 MIR1285-1-201ENST00000408593 84 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 HMGN2P10-201ENST00000448085 265 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC096751.1-202ENST00000502691 1067 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 TPT1P8-201ENST00000510120 555 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC007038.2-201ENST00000608095 740 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 RNU11-5P-201ENST00000391216 129 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 SEPT2P1-201ENST00000419651 180 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 RPL31P35-201ENST00000431058 377 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 KATNBL1P4-201ENST00000503545 918 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC036111.3-201ENST00000526389 112 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 SNORD14A-201ENST00000606526 91 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC130650.2-201ENST00000618736 2403 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 TXNP7-201ENST00000406296 293 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC021755.4-201ENST00000616620 456 ntBASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.74□□□□□ -2.29
ALMS1Q8TCU4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 Y_RNA.303-201ENST00000364998 94 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 FAM106CP-201ENST00000582212 507 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AC010889.1-201ENST00000566193 2666 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 RPL23AP6-201ENST00000446637 472 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 RNA5SP310-201ENST00000459084 116 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 RNA5SP252-201ENST00000391131 119 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AC079780.1-201ENST00000428259 207 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 NEFMP1-201ENST00000443423 1006 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AC008269.2-201ENST00000561915 1105 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 MIR2909-201ENST00000617113 69 ntBASIC0.73□□□□□ -2.29
ALMS1Q8TCU4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 SNORA62.1-201ENST00000364287 154 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 OR51A5P-201ENST00000415429 942 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 BNIP3P7-201ENST00000605641 516 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AC006963.1-201ENST00000624003 1052 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 Y_RNA.60-201ENST00000362831 98 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 RNU6-19P-201ENST00000384718 107 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 CBX3P6-201ENST00000430257 527 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AL591212.2-201ENST00000433923 257 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 RPL30P12-201ENST00000474666 353 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 RNU4-38P-201ENST00000364472 129 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AC098592.2-201ENST00000413158 265 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 SNRPEP10-201ENST00000420249 274 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 CR848007.2-201ENST00000424918 787 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AL512661.1-201ENST00000434586 1253 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AC108157.1-201ENST00000510511 539 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AC103833.1-201ENST00000517442 172 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 MIR3122-201ENST00000577243 73 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AL512605.2-201ENST00000592972 256 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 LINC02211-204ENST00000642024 1070 ntBASIC0.72□□□□□ -2.29
ALMS1Q8TCU4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.71□□□□□ -2.3
ALMS1Q8TCU4 AC005534.2-201ENST00000431047 433 ntBASIC0.71□□□□□ -2.3
ALMS1Q8TCU4 AC093716.1-201ENST00000435923 377 ntBASIC0.71□□□□□ -2.3
ALMS1Q8TCU4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.71□□□□□ -2.3
ALMS1Q8TCU4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ALMS1Q8TCU4 AC104108.1-201ENST00000509930 412 ntBASIC0.71□□□□□ -2.3
ALMS1Q8TCU4 CBX3P7-201ENST00000532876 502 ntBASIC0.71□□□□□ -2.3
ALMS1Q8TCU4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.71□□□□□ -2.3
ALMS1Q8TCU4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms