Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL132765.2-201ENST00000610812 351 ntBASIC3.34□□□□□ -1.87
LMO3Q8TAP4 AC245517.5-201ENST00000611529 162 ntBASIC3.34□□□□□ -1.87
LMO3Q8TAP4 AL442067.2-201ENST00000614033 363 ntBASIC3.34□□□□□ -1.87
LMO3Q8TAP4 AL354950.2-201ENST00000617939 290 ntBASIC3.34□□□□□ -1.87
LMO3Q8TAP4 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
LMO3Q8TAP4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.34□□□□□ -1.87
LMO3Q8TAP4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO3Q8TAP4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LMO3Q8TAP4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
LMO3Q8TAP4 AL157700.1-201ENST00000561973 1432 ntBASIC3.34□□□□□ -1.88
LMO3Q8TAP4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 RNU4-79P-201ENST00000362764 141 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 Y_RNA.255-201ENST00000364581 97 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 SNORA54-201ENST00000384281 123 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 MIR19A-201ENST00000384878 82 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 U3.29-201ENST00000391296 212 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 RPL21P3-201ENST00000395517 478 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AL356432.1-201ENST00000405809 419 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 MTCO3P46-201ENST00000425787 232 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 DDX3P2-201ENST00000446138 111 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AL118496.2-201ENST00000448300 230 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC146507.2-201ENST00000460608 476 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC233702.1-201ENST00000482905 502 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AL163973.1-201ENST00000484753 577 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 RN7SL504P-201ENST00000494496 287 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 TMEM248P1-201ENST00000510579 951 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 SNORD27.1-201ENST00000516319 72 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 OR5BN1P-201ENST00000532955 829 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC023050.3-201ENST00000541142 333 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 MIR5004-201ENST00000579078 107 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC113194.1-201ENST00000606037 500 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 FRG1KP-201ENST00000623592 341 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AL159972.1-201ENST00000625150 448 ntBASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LMO3Q8TAP4 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 SNORA63.1-201ENST00000362493 131 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 SNORA51.2-201ENST00000364595 132 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 RNY3P13-201ENST00000365542 102 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 SNORD67-201ENST00000390833 111 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 RNU6-332P-201ENST00000391193 108 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AL591416.1-201ENST00000404015 867 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 RN7SKP32-201ENST00000410167 303 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 RPS20P5-201ENST00000434808 360 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC016696.1-201ENST00000446949 318 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC034236.1-201ENST00000469891 373 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 RPL38P4-201ENST00000502376 214 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 COX7A2P2-201ENST00000505291 250 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC112206.3-201ENST00000514578 389 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC105417.1-201ENST00000514691 285 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 SCARNA15.1-201ENST00000516384 125 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 Y_RNA.675-201ENST00000516389 149 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 RNU6-410P-201ENST00000517006 107 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 SUB1P1-201ENST00000524415 382 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 PSMA2P1-201ENST00000526365 646 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 MIR3186-201ENST00000577404 85 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 GLUD1P4-201ENST00000590914 418 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC010525.2-201ENST00000590920 195 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AL050343.2-201ENST00000607338 280 ntBASIC3.32□□□□□ -1.88
LMO3Q8TAP4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LMO3Q8TAP4 AL035425.3-201ENST00000564206 4996 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms