Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CTHRC1P1-201ENST00000605383 469 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC019193.3-201ENST00000609144 554 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 7SK.10-201ENST00000621414 298 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AL078596.1-201ENST00000624856 447 ntBASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIMC1Q8NDZ2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 ZNF962P-201ENST00000443465 3140 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 Y_RNA.31-201ENST00000362574 102 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 U3.11-201ENST00000364476 212 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 SNORA62.3-201ENST00000365110 153 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 SNORD6-201ENST00000365444 73 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 Y_RNA.414-201ENST00000384011 101 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 Y_RNA.530-201ENST00000384587 101 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-1105P-201ENST00000384774 107 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL109755.1-201ENST00000401791 649 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 RNU6-628P-201ENST00000410675 107 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC113618.1-201ENST00000416747 285 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 PPP1R11P2-201ENST00000423543 382 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 RPL23AP38-201ENST00000423801 469 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 COX6B1P7-201ENST00000430845 235 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 HMGB3P11-201ENST00000440127 604 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 PRPS1P1-201ENST00000445305 876 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 CEACAMP4-201ENST00000457676 421 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 snoU13.22-201ENST00000459428 104 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 RNU7-66P-201ENST00000459469 62 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 RPL23AP11-201ENST00000475260 469 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC105137.1-201ENST00000484355 562 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC011979.2-201ENST00000527568 352 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AP000857.1-201ENST00000532151 543 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL133271.1-201ENST00000538229 291 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL118558.2-201ENST00000556294 238 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 MIR3942-201ENST00000585264 109 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 MIR486-1-201ENST00000612171 68 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 FAM27D1-201ENST00000612308 341 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL132822.1-201ENST00000617063 513 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL445567.2-201ENST00000618935 498 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 U7.8-201ENST00000619968 63 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC244100.1-202ENST00000621554 382 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AF127577.6-201ENST00000623352 2191 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 MIR3653-201ENST00000625572 110 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC002546.1-201ENST00000588041 2504 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AC066616.2-201ENST00000559334 1481 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 AL138713.1-201ENST00000624026 2130 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 EXOC5P1-201ENST00000510543 1969 ntBASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIMC1Q8NDZ2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
SIMC1Q8NDZ2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SIMC1Q8NDZ2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.9□□□□□ -1.78
SIMC1Q8NDZ2 AC007823.1-201ENST00000569932 1566 ntBASIC3.9□□□□□ -1.78
SIMC1Q8NDZ2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SIMC1Q8NDZ2 AC090740.1-201ENST00000623193 2262 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 Y_RNA.197-201ENST00000364004 102 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 RNU6-1013P-201ENST00000384180 107 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 RNU6-574P-201ENST00000384265 107 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 AL356057.3-201ENST00000402607 340 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 RNU2-29P-201ENST00000410423 189 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 BX323014.1-201ENST00000412876 237 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 PMCHL1-202ENST00000423102 261 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 AL358176.2-201ENST00000425769 204 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 MED13P1-201ENST00000428342 171 ntBASIC3.9□□□□□ -1.79
SIMC1Q8NDZ2 AL590383.1-201ENST00000428602 75 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms