Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AC126755.2-208ENST00000327792 462 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AC138969.1-213ENST00000331436 462 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 RNU5E-1-201ENST00000362477 120 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 U3.4-201ENST00000363352 213 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 RNU4-91P-201ENST00000364778 135 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 RNU5E-6P-201ENST00000365574 115 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 SMIM11P1-201ENST00000369586 178 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 SNORA54-201ENST00000384281 123 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 RN7SKP220-201ENST00000410611 288 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 RNU4-47P-201ENST00000410876 114 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 BTF3L4P3-201ENST00000418879 476 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AC069157.1-201ENST00000421749 137 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 RAC1P6-201ENST00000423911 575 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AL365496.1-201ENST00000426885 215 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 ELOCP14-201ENST00000428070 331 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AL445584.1-201ENST00000431451 330 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 ELOCP7-201ENST00000439968 331 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 RPS24P13-201ENST00000442520 397 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 Z75741.1-201ENST00000446793 314 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 NIPA2P5-201ENST00000452282 464 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 RPL12P25-201ENST00000455592 494 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AC091153.1-201ENST00000466297 402 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 MTND1P3-201ENST00000484956 952 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 Y_RNA.672-201ENST00000516289 104 ntBASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC197Q8NCU1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 GNG5P1-201ENST00000255500 204 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 HSPE1P11-201ENST00000339579 310 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RPL32P3-201ENST00000359025 275 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RNU1-33P-201ENST00000364249 162 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RNY3P10-201ENST00000384764 102 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 FO393413.1-201ENST00000402892 195 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 MRPL42P2-201ENST00000403169 426 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RPS3AP3-201ENST00000411933 242 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AL645937.1-202ENST00000421799 937 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC007283.2-201ENST00000424739 197 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 ISCA1P1-201ENST00000426679 387 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AL022238.1-201ENST00000442557 355 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 MTND2P4-201ENST00000445034 1004 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 FABP5P15-201ENST00000453566 214 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RNA5SP269-201ENST00000459032 137 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RNU7-23P-201ENST00000459465 62 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC009901.1-201ENST00000506703 541 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RNU2-10P-201ENST00000516375 211 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RNU6-1092P-201ENST00000516955 87 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 RNU2-46P-201ENST00000517038 113 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC011979.2-201ENST00000527568 352 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC020895.1-201ENST00000595362 272 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 CLIC4P2-201ENST00000601934 717 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AL590229.1-201ENST00000603497 542 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC007363.1-201ENST00000604736 620 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AL590392.1-201ENST00000604960 446 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC019159.1-201ENST00000605094 187 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 BX323046.1-201ENST00000610145 535 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AL161629.2-201ENST00000615347 275 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AL034408.1-202ENST00000636088 415 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 AL137003.2-201ENST00000606924 2538 ntBASIC2.68□□□□□ -1.98
CCDC197Q8NCU1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC138915.1-201ENST00000565427 1685 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 UBE2L2-201ENST00000254302 429 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 MIR490-201ENST00000384865 128 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 RNU6-817P-201ENST00000391083 104 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 RPL23AP32-201ENST00000395315 459 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 MIR888-201ENST00000401186 77 ntBASIC2.67□□□□□ -1.98
CCDC197Q8NCU1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms