Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AC126323.6-202ENST00000568092 3511 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AL592182.3-201ENST00000642132 3304 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-37P-201ENST00000362692 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 Y_RNA.47-201ENST00000362697 108 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-11P-201ENST00000364234 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-7-201ENST00000364784 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-8-201ENST00000365467 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-25P-201ENST00000383873 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-1-201ENST00000383898 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-48P-201ENST00000384161 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-36P-201ENST00000384172 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 Y_RNA.452-201ENST00000384202 108 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-4P-201ENST00000384205 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-5P-201ENST00000384238 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-3P-201ENST00000384314 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-16P-201ENST00000384385 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-15P-201ENST00000384534 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-2-201ENST00000384627 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-29P-201ENST00000384637 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-9-201ENST00000384776 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-33P-201ENST00000384793 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 HMGB3P2-201ENST00000411913 584 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 TMSB10P2-201ENST00000416049 131 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 BX276092.3-201ENST00000424182 230 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RPL18P10-201ENST00000425606 538 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 DNAJC19P7-201ENST00000428811 344 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 PIGFP3-201ENST00000441918 722 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 OR51K1P-201ENST00000510214 950 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 TRAV32-201ENST00000553993 340 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 SUB1P3-201ENST00000564581 315 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RPL7P50-201ENST00000600588 727 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AC018889.1-201ENST00000605372 397 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-6P-201ENST00000606623 107 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AP005019.3-201ENST00000620418 560 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 AC116096.1-201ENST00000566804 2314 ntBASIC4.26□□□□□ -1.73
ARHGEF39Q8N4T4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 MAPK10-286ENST00000641208 8747 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 SNORA7.2-201ENST00000364446 145 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 Y_RNA.314-201ENST00000365114 102 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-741P-201ENST00000383889 107 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 MIR141-201ENST00000384975 95 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-101P-201ENST00000410323 104 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 RNU2-33P-201ENST00000410344 192 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-174P-201ENST00000410406 106 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 PGBD4P6-201ENST00000421501 610 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 RPL21P66-201ENST00000426566 466 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC093151.1-201ENST00000427711 313 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AL158071.1-201ENST00000430315 461 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AL031274.1-201ENST00000450334 232 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 CECR9-201ENST00000453421 199 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 RPL21P126-201ENST00000470049 478 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 RPL21P13-201ENST00000488305 481 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 RPL17P19-201ENST00000489069 552 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC069499.1-201ENST00000489433 509 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 SNORA70.16-201ENST00000516390 95 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC053481.4-201ENST00000583164 216 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC104695.3-201ENST00000604052 296 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AP000787.2-201ENST00000604432 568 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AL121917.1-203ENST00000605534 577 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC020634.1-201ENST00000608701 549 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 AC090132.2-201ENST00000615881 347 ntBASIC4.25□□□□□ -1.73
ARHGEF39Q8N4T4 U4.1-201ENST00000620349 87 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms