Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC079781.2-201ENST00000446424 169 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 Z75741.1-201ENST00000446793 314 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AL671855.1-201ENST00000446875 1203 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC013267.1-201ENST00000458227 267 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 snoU13.4-201ENST00000458916 104 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 SNORD97-201ENST00000459187 142 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AP001486.1-201ENST00000463339 476 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AL049873.1-201ENST00000480540 376 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 RPL21P13-201ENST00000488305 481 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 FCF1P3-201ENST00000496394 590 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 RPL23AP55-201ENST00000498163 452 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 ARL4AP2-201ENST00000507378 601 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 RNU6-410P-201ENST00000517006 107 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 ERHP1-201ENST00000523006 310 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 FAM60DP-201ENST00000524174 632 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 SNRPGP16-201ENST00000533275 226 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC011602.1-201ENST00000546484 331 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 SUB1P2-201ENST00000556401 297 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 MIR4325-201ENST00000583049 90 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AP002360.4-201ENST00000606980 481 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC068944.2-201ENST00000610373 403 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC135507.2-201ENST00000612443 309 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AL390240.1-201ENST00000612950 384 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC022149.2-201ENST00000621061 203 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AL160394.1-201ENST00000624765 724 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AL353743.1-202ENST00000431724 1695 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 MFSD8-233ENST00000641482 4860 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 RNU5E-6P-201ENST00000365574 115 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 RNU6-74P-201ENST00000384235 107 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 CIR1P3-201ENST00000405137 479 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 RNU2-36P-201ENST00000410361 191 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 RNU6-55P-201ENST00000411092 107 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 RNU6-954P-201ENST00000411355 107 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 MED13P1-201ENST00000428342 171 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 FGF7P6-202ENST00000451282 293 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AC010631.1-201ENST00000474150 156 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AC006483.1-201ENST00000487308 313 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 VN1R104P-201ENST00000505115 1009 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AC009646.1-201ENST00000510455 318 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 RNA5SP468-201ENST00000516782 93 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AL359212.1-201ENST00000556608 614 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 AC005609.4-201ENST00000625071 447 ntBASIC3.63□□□□□ -1.83
VPS52Q8N1B4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS52Q8N1B4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AF117829.1-206ENST00000621883 3802 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC007496.3-201ENST00000624987 3443 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 SDAD1P2-201ENST00000441308 2028 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 RNU6-456P-201ENST00000384493 107 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 RPS4XP8-201ENST00000402039 771 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AL122016.1-201ENST00000403365 367 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 MTATP6P18-201ENST00000417994 673 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 DPPA2P1-201ENST00000428060 556 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 USP12PX-201ENST00000432383 1057 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 SNRPGP6-201ENST00000451124 220 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 MTND2P24-201ENST00000453434 806 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS52Q8N1B4 AC010401.1-201ENST00000463867 348 ntBASIC3.62□□□□□ -1.83
VPS52Q8N1B4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms