Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SIX5Q8N196 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX5Q8N196 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX5Q8N196 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIX5Q8N196 AC099654.2-201ENST00000433031 1980 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC092376.2-201ENST00000622621 4116 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX5Q8N196 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX5Q8N196 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX5Q8N196 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SIX5Q8N196 RNU6-1181P-201ENST00000384191 106 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 Y_RNA.518-201ENST00000384552 113 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 Z85995.1-201ENST00000415547 335 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 RPL27AP8-201ENST00000424277 446 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC004975.1-201ENST00000428733 208 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX5Q8N196 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX5Q8N196 AL354714.3-201ENST00000447284 493 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.18□□□□□ -1.58
SIX5Q8N196 RPL23AP24-201ENST00000458203 385 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX5Q8N196 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SIX5Q8N196 AC025465.3-201ENST00000510570 311 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC006427.1-201ENST00000514359 712 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 RN7SKP276-201ENST00000516242 268 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.18□□□□□ -1.58
SIX5Q8N196 AP001880.2-201ENST00000538233 448 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 MED28P6-201ENST00000558776 231 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX5Q8N196 MIR4715-201ENST00000584117 79 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC012433.1-201ENST00000588916 398 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC006557.5-201ENST00000603126 811 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC073410.2-201ENST00000603240 332 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 SRGNP1-201ENST00000603392 451 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AL139395.1-201ENST00000603662 160 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 AC098479.1-201ENST00000609225 154 ntBASIC5.18□□□□□ -1.58
SIX5Q8N196 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX5Q8N196 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX5Q8N196 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SIX5Q8N196 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX5Q8N196 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
SIX5Q8N196 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX5Q8N196 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SIX5Q8N196 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX5Q8N196 Y_RNA.27-201ENST00000362540 103 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 SNORD27-201ENST00000363981 72 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
SIX5Q8N196 U3.22-201ENST00000391120 215 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX5Q8N196 RNU2-25P-201ENST00000411041 191 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 RAC1P3-201ENST00000416129 580 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 RPL21P38-201ENST00000418090 167 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX5Q8N196 RPL21P91-201ENST00000429231 479 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 RPS17P8-201ENST00000434525 335 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX5Q8N196 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX5Q8N196 GLUD1P3-202ENST00000508551 200 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 AC074250.1-201ENST00000511117 192 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 SNORA31.19-201ENST00000517079 126 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 AC026470.2-201ENST00000561492 181 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX5Q8N196 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX5Q8N196 AC006077.1-201ENST00000604746 343 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 uc_338.7-201ENST00000621834 124 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 AC068724.3-201ENST00000625906 87 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 BMS1P21-201ENST00000634565 365 ntBASIC5.17□□□□□ -1.58
SIX5Q8N196 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SIX5Q8N196 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX5Q8N196 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX5Q8N196 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX5Q8N196 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX5Q8N196 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX5Q8N196 SNORD50.1-201ENST00000362987 71 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RNU6-200P-201ENST00000364743 107 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RNU6-741P-201ENST00000383889 107 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RNU6-1062P-201ENST00000383908 107 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 Y_RNA.416-201ENST00000384014 113 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 RNU6-708P-201ENST00000384217 107 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX5Q8N196 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX5Q8N196 AL358472.1-201ENST00000431295 329 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 AL591043.1-201ENST00000432461 424 ntBASIC5.16□□□□□ -1.58
SIX5Q8N196 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms