Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TMEM167AP1-201ENST00000423409 219 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AL360271.2-201ENST00000447710 161 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 NUTF2P3-201ENST00000448540 384 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC133134.1-201ENST00000466800 359 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 MRPL42P6-201ENST00000486397 371 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 RN7SKP46-201ENST00000515942 234 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 RNU6-352P-201ENST00000516908 107 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC087369.1-201ENST00000520775 996 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 MRPS18CP4-201ENST00000535821 231 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC010186.2-204ENST00000537668 439 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC133555.2-201ENST00000550213 292 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AL442163.3-201ENST00000554110 156 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC120057.2-201ENST00000571520 271 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 MIR5696-201ENST00000578474 85 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 MIR5692A1-201ENST00000580523 69 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC006329.2-201ENST00000611491 394 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 U6.106-201ENST00000636360 105 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC083843.3-201ENST00000623679 2186 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 ZFRP1-201ENST00000457579 2970 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AC009951.1-201ENST00000623674 2614 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 SNORD50.1-201ENST00000362987 71 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 Y_RNA.292-201ENST00000364904 97 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 Y_RNA.358-201ENST00000365491 99 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 UBBP2-201ENST00000376781 231 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 RNU6-937P-201ENST00000384325 106 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 RNU6-959P-201ENST00000384671 107 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 MIR521-1-201ENST00000384902 87 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AL590762.2-201ENST00000395798 571 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AL079342.1-201ENST00000401460 267 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 MTCYBP2-201ENST00000407745 171 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 RPL30P3-201ENST00000424262 333 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 TDGF1P1-201ENST00000445734 527 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 RPS5P7-201ENST00000456664 608 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 RNU6-496P-201ENST00000516145 99 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 RNU1-6P-201ENST00000516290 144 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AC109479.2-201ENST00000517842 174 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 CR383656.7-201ENST00000548164 174 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AC023824.2-201ENST00000566185 400 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AL034351.1-201ENST00000605288 668 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AC123912.5-201ENST00000605470 343 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 FAM27B-201ENST00000610601 213 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATG4DQ86TL0 AP000542.2-201ENST00000623199 6179 ntBASIC4.32□□□□□ -1.72
ATG4DQ86TL0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC005332.5-201ENST00000591222 2919 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 Y_RNA.44-201ENST00000362676 108 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 U3.13-201ENST00000364804 214 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 RPL21P75-201ENST00000396599 483 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 RPL21P28-201ENST00000401418 483 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 HSPE1P8-201ENST00000406997 288 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 RNU6-651P-201ENST00000411040 105 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 CYCSP33-201ENST00000414485 327 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 EI24P1-201ENST00000416584 867 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC099677.1-201ENST00000420575 175 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AL590556.1-201ENST00000423231 483 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AL031659.1-201ENST00000447075 539 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 RPL23AP81-201ENST00000455252 467 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 RNA5SP103-201ENST00000459503 118 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 RPL21P11-201ENST00000461458 483 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 RPL21P39-201ENST00000463605 483 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC108751.2-201ENST00000469993 231 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AL049830.2-201ENST00000480072 201 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC132942.1-201ENST00000486753 483 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC093591.1-201ENST00000491435 481 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms