| ATG9A | Q7Z3C6 | AC027343.1-201 | ENST00000504765 | 407 nt | TSL 4 BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | KLHL2P1-201 | ENST00000508691 | 521 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | RNU6-798P-201 | ENST00000516912 | 103 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | A2ML1-AS1-201 | ENST00000537288 | 452 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AGGF1P4-201 | ENST00000568249 | 801 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | MIR3162-201 | ENST00000581818 | 82 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC090578.1-201 | ENST00000604955 | 591 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC004832.5-201 | ENST00000608677 | 401 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC006566.1-201 | ENST00000608943 | 513 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL360181.4-201 | ENST00000621752 | 134 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | ATXN3L-201 | ENST00000380622 | 2164 nt | APPRIS P1 BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | NEB-218 | ENST00000603639 | 25578 nt | APPRIS ALT2 TSL 5 BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | NEB-219 | ENST00000604864 | 25578 nt | APPRIS ALT2 TSL 5 BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC092435.3-201 | ENST00000565538 | 3654 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | DST-204 | ENST00000361203 | 22431 nt | APPRIS ALT2 TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | SENP7-205 | ENST00000394091 | 4434 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | TAB3P1-202 | ENST00000452645 | 1634 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | Y_RNA.359-201 | ENST00000365498 | 102 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | RNU6-348P-201 | ENST00000384386 | 107 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | MIR135A2-201 | ENST00000384854 | 100 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | RNU6ATAC40P-201 | ENST00000408580 | 137 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | CCDC126-203 | ENST00000410069 | 890 nt | APPRIS P1 TSL 1 (best) BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | RNU6-248P-201 | ENST00000410720 | 107 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | C1DP2-201 | ENST00000418167 | 426 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL022396.1-201 | ENST00000427011 | 386 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | OR4K11P-201 | ENST00000431829 | 904 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL138900.2-201 | ENST00000434098 | 156 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC006458.1-201 | ENST00000445093 | 653 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL136380.1-201 | ENST00000447970 | 162 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | TPT1P14-201 | ENST00000448018 | 505 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | UTAT33-202 | ENST00000449177 | 565 nt | TSL 2 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL589678.1-201 | ENST00000452685 | 561 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | MTND1P12-201 | ENST00000455231 | 147 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | snoU13.4-201 | ENST00000458916 | 104 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC105389.2-201 | ENST00000506475 | 435 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | EPGN-208 | ENST00000509145 | 222 nt | TSL 1 (best) BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC096736.1-201 | ENST00000512609 | 947 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC063919.1-201 | ENST00000514281 | 254 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | SNORA18.6-201 | ENST00000516792 | 115 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AP003392.2-201 | ENST00000527269 | 208 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC011979.2-201 | ENST00000527568 | 352 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AP000857.1-201 | ENST00000532151 | 543 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | NTS-203 | ENST00000551529 | 801 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC020978.4-201 | ENST00000569088 | 460 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | FOPNL-205 | ENST00000573429 | 646 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | MIR4528-201 | ENST00000577763 | 90 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | OR4K8P-201 | ENST00000578842 | 1048 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | MIR3146-201 | ENST00000580367 | 79 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | ZNF861P-201 | ENST00000588126 | 639 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC099566.1-211 | ENST00000595188 | 737 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC073648.5-201 | ENST00000603502 | 305 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC091805.2-201 | ENST00000603848 | 235 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL136363.2-201 | ENST00000604173 | 851 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC008277.2-201 | ENST00000605196 | 797 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC005046.1-201 | ENST00000608515 | 625 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL355472.4-201 | ENST00000610233 | 626 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | CDKN2B-AS.1-201 | ENST00000617921 | 150 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC012150.2-201 | ENST00000621300 | 544 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC112204.3-201 | ENST00000623822 | 332 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | MARCH6-215 | ENST00000640713 | 231 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC093725.1-201 | ENST00000508135 | 2672 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | SYNE1-212 | ENST00000423061 | 27436 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.38 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | EXOC6-203 | ENST00000371552 | 3564 nt | TSL 5 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | METTL18-201 | ENST00000303469 | 1426 nt | APPRIS P1 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | ARHGAP11A-207 | ENST00000565905 | 3318 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | ZNF66-201 | ENST00000344519 | 1745 nt | APPRIS P1 TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | RNU6-629P-201 | ENST00000384061 | 103 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | MIR19A-201 | ENST00000384878 | 82 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL109755.1-201 | ENST00000401791 | 649 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | RNU6-1077P-201 | ENST00000410506 | 102 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | RNA5SP184-201 | ENST00000411071 | 108 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | ELOCP17-201 | ENST00000414751 | 326 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL590783.1-201 | ENST00000424138 | 456 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL135908.1-201 | ENST00000431394 | 446 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | LINC01807-201 | ENST00000432481 | 676 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL078581.2-201 | ENST00000446392 | 378 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC007557.1-201 | ENST00000451711 | 541 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | NDUFA6-201 | ENST00000470753 | 475 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC096751.1-202 | ENST00000502691 | 1067 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC108517.1-201 | ENST00000512546 | 327 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | NCRNA00250-201 | ENST00000519500 | 519 nt | TSL 4 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | C11orf1-204 | ENST00000530214 | 599 nt | TSL 5 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AL136146.2-201 | ENST00000534594 | 494 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC123904.2-201 | ENST00000548059 | 300 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | LINC02464-201 | ENST00000552060 | 368 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC087481.2-201 | ENST00000565492 | 330 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | SMG1P7-203 | ENST00000573141 | 619 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC078795.2-201 | ENST00000602835 | 1252 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC245014.2-201 | ENST00000603689 | 287 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC246785.4-201 | ENST00000605374 | 287 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC007619.2-201 | ENST00000605743 | 379 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | uc_338.12-201 | ENST00000616344 | 181 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC006111.3-201 | ENST00000622137 | 383 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC008781.3-201 | ENST00000622826 | 335 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC019226.1-201 | ENST00000625666 | 515 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | STAU2-201 | ENST00000355780 | 4061 nt | TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | LINC01419-201 | ENST00000522365 | 1521 nt | TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | AC092447.7-201 | ENST00000422212 | 1621 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | ZNF680-202 | ENST00000447137 | 2159 nt | TSL 2 BASIC | 3.36 | □□□□□ -1.87 | | |
| ATG9A | Q7Z3C6 | ANKRD36C-201 | ENST00000295246 | 2272 nt | TSL 5 BASIC | 3.36 | □□□□□ -1.87 | | |