Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MTCO2P19-201ENST00000427513 598 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 MED13P1-201ENST00000428342 171 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 RPL36AP6-201ENST00000435770 321 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC020550.1-201ENST00000447385 163 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 SNORA31.3-201ENST00000516029 96 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 SNORA70.16-201ENST00000516390 95 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 SCARNA24.1-201ENST00000516465 137 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 NRON-201ENST00000517270 370 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC068657.1-201ENST00000520807 306 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 FAM60DP-201ENST00000524174 632 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC037471.2-201ENST00000564941 598 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 TPRKBP2-201ENST00000565969 475 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC005951.2-201ENST00000576282 495 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AF038458.1-201ENST00000588406 262 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AL161734.1-201ENST00000609720 557 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC099506.2-201ENST00000623074 221 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 AC018692.3-201ENST00000623929 123 ntBASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.69□□□□□ -1.82
SYNE3Q6ZMZ3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 MIR208A-201ENST00000362287 71 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 Y_RNA.159-201ENST00000363674 87 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-960P-201ENST00000364056 120 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-39P-201ENST00000384344 107 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 MIR514A1-201ENST00000385133 98 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 MIR1290-201ENST00000408735 78 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 RPS3AP44-201ENST00000425466 790 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AC079781.2-201ENST00000446424 169 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AC114797.1-201ENST00000514003 728 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 MTND1P5-201ENST00000517906 940 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AC093012.1-202ENST00000549403 582 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 TRAV37-201ENST00000553906 342 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AL391646.1-201ENST00000603860 190 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AL136363.1-201ENST00000605349 337 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AC010133.1-201ENST00000615809 842 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AC068792.1-201ENST00000621354 417 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 AC124864.2-201ENST00000624736 186 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 FAM35CP-201ENST00000554755 2470 ntBASIC3.68□□□□□ -1.82
SYNE3Q6ZMZ3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 SNORD46.1-201ENST00000364139 104 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 RNY1P12-201ENST00000364251 105 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 RNU1-39P-201ENST00000383897 165 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 Y_RNA.619-201ENST00000410951 90 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AL451054.2-201ENST00000420896 202 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC008850.1-201ENST00000427546 362 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 C8orf59P1-201ENST00000429930 303 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AL353705.1-201ENST00000433468 480 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 GPR143P-201ENST00000434155 205 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 SNRPGP6-201ENST00000451124 220 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC126182.1-201ENST00000478134 357 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC007182.2-201ENST00000489251 402 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 SNORD27.1-201ENST00000516319 72 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-506P-201ENST00000516553 94 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 RNU7-51P-201ENST00000516560 62 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-410P-201ENST00000517006 107 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC017083.3-201ENST00000609955 700 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC090132.2-201ENST00000615881 347 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 U4.5-201ENST00000617137 123 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AL359880.1-201ENST00000621879 266 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 FRG1KP-201ENST00000623592 341 ntBASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.67□□□□□ -1.82
SYNE3Q6ZMZ3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SYNE3Q6ZMZ3 MIR148B-201ENST00000362252 99 ntBASIC3.66□□□□□ -1.82
SYNE3Q6ZMZ3 RNU5A-1-201ENST00000362698 116 ntBASIC3.66□□□□□ -1.82
SYNE3Q6ZMZ3 DEFB109C-201ENST00000382575 264 ntBASIC3.66□□□□□ -1.82
SYNE3Q6ZMZ3 DEFB109B-201ENST00000382656 264 ntBASIC3.66□□□□□ -1.82
SYNE3Q6ZMZ3 RNU6-74P-201ENST00000384235 107 ntBASIC3.66□□□□□ -1.82
SYNE3Q6ZMZ3 SNORA7.4-201ENST00000384249 137 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms