Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 OR4G1P-203ENST00000641984 1631 ntBASIC3.7□□□□□ -1.82
VSTM1Q6UX27 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VSTM1Q6UX27 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 FRG1CP-201ENST00000358464 769 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNU4-35P-201ENST00000362588 141 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNU1-33P-201ENST00000364249 162 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNA5SP235-201ENST00000365411 114 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNA5SP167-201ENST00000365461 116 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNU6-629P-201ENST00000384061 103 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNU6-1029P-201ENST00000384109 107 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 MIR490-201ENST00000384865 128 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 SNORD17-201ENST00000390930 237 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNU6-837P-201ENST00000391056 108 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNU6-55P-201ENST00000411092 107 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RNU6-954P-201ENST00000411355 107 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AC099677.1-201ENST00000420575 175 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AC097713.2-201ENST00000430199 356 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AC004866.2-201ENST00000438285 481 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 UBE2V1P7-201ENST00000446395 340 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 HMGB3P8-201ENST00000449709 577 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 RPL23AP14-201ENST00000468281 468 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AC010631.1-201ENST00000474150 156 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AC010486.1-201ENST00000511793 424 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 SRGNP1-201ENST00000603392 451 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AC012443.1-201ENST00000605605 231 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AL603758.1-201ENST00000618654 241 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AL353748.2-201ENST00000622148 471 ntBASIC3.69□□□□□ -1.82
VSTM1Q6UX27 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VSTM1Q6UX27 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 MIR208A-201ENST00000362287 71 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 SNORA70.4-201ENST00000365509 134 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 SNORA24.1-201ENST00000384401 135 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 SNORD37.1-201ENST00000390968 65 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 RNU6-903P-201ENST00000391270 109 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AL162578.1-201ENST00000406202 378 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 RNA5SP118-201ENST00000410385 109 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 PDCL2P1-201ENST00000419302 352 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 BX679664.1-201ENST00000434429 253 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC090774.1-201ENST00000435925 246 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC005019.1-201ENST00000436455 431 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 MTCO3P45-201ENST00000443036 613 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC025518.1-201ENST00000479856 347 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 SNORD60.2-201ENST00000516883 86 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC011712.1-201ENST00000588959 234 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC022149.2-201ENST00000621061 203 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AL136221.1-201ENST00000621449 509 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 AC112487.2-201ENST00000637950 304 ntBASIC3.68□□□□□ -1.82
VSTM1Q6UX27 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VSTM1Q6UX27 MTND5P3-201ENST00000438536 1800 ntBASIC3.67□□□□□ -1.82
VSTM1Q6UX27 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 RNU6-552P-201ENST00000362869 119 ntBASIC3.67□□□□□ -1.82
VSTM1Q6UX27 SNORA23-201ENST00000365128 182 ntBASIC3.67□□□□□ -1.82
VSTM1Q6UX27 Y_RNA.529-201ENST00000384586 119 ntBASIC3.67□□□□□ -1.82
VSTM1Q6UX27 PTMAP5-201ENST00000393073 333 ntBASIC3.67□□□□□ -1.82
VSTM1Q6UX27 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 RNU2-43P-201ENST00000410306 190 ntBASIC3.67□□□□□ -1.82
VSTM1Q6UX27 Y_RNA.615-201ENST00000410769 117 ntBASIC3.67□□□□□ -1.82
VSTM1Q6UX27 RPL31P12-201ENST00000422587 358 ntBASIC3.67□□□□□ -1.82
VSTM1Q6UX27 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.67□□□□□ -1.82
VSTM1Q6UX27 CBWD4P-201ENST00000445695 655 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms