Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 AC018714.1-201ENST00000605028 208 ntBASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 AL603758.1-201ENST00000618654 241 ntBASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHROOM1Q2M3G4 OR4G2P-202ENST00000641004 1759 ntBASIC2.9□□□□□ -1.94
SHROOM1Q2M3G4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.94
SHROOM1Q2M3G4 AC092447.10-201ENST00000620607 1652 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 Y_RNA.18-201ENST00000362461 102 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 RNU6-359P-201ENST00000365466 108 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 RNU6-637P-201ENST00000384050 107 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 RNU4-53P-201ENST00000410828 140 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 NDUFB4P7-201ENST00000423198 363 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 FAM103A2P-201ENST00000444122 354 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 RPS15AP34-201ENST00000487776 387 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 RPS27P26-201ENST00000494583 239 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 RPS29P21-201ENST00000496272 170 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 YWHAEP4-201ENST00000505390 198 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC234781.5-201ENST00000508429 271 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 Y_RNA.717-201ENST00000517106 92 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC136618.2-201ENST00000575091 400 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC021171.1-201ENST00000603137 706 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AL161734.1-201ENST00000609720 557 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC245517.5-201ENST00000611529 162 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 UCA1.1-201ENST00000620952 75 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AC079597.1-201ENST00000624306 508 ntBASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SHROOM1Q2M3G4 AL137003.2-201ENST00000606924 2538 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC092125.1-201ENST00000562568 1995 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 RNA5SP432-201ENST00000362480 116 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AL359511.1-201ENST00000402970 211 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 RNU6-516P-201ENST00000411381 104 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 SPA17P1-201ENST00000416656 452 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC005005.2-201ENST00000420779 380 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 PPP1R11P2-201ENST00000423543 382 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 TAAR7P-201ENST00000436141 242 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 UBE2V1P13-201ENST00000436983 439 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AL606662.1-201ENST00000445763 553 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AL513124.1-201ENST00000450410 614 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 snoU13.28-201ENST00000459235 104 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 LINC00888-204ENST00000487386 421 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC106872.3-201ENST00000495104 446 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 RNA5SP216-201ENST00000516111 123 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AP004247.1-201ENST00000531556 1289 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC009094.1-201ENST00000564443 426 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AC005951.2-201ENST00000576282 495 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AP000811.1-201ENST00000603803 651 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 AP000770.2-201ENST00000623694 100 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 PCMTD1P7-201ENST00000634506 357 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 MIR203B-201ENST00000636080 86 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 OR5H6-203ENST00000642105 978 ntBASIC2.89□□□□□ -1.95
SHROOM1Q2M3G4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 U8.2-201ENST00000363156 134 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 U3.20-201ENST00000390909 217 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 AL359704.1-201ENST00000411586 781 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 AC018630.2-202ENST00000422992 927 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 UBE2D3P1-201ENST00000436669 444 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 MTND5P2-201ENST00000442927 1142 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 MTCYBP3-201ENST00000445588 1137 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 TPT1P14-201ENST00000448018 505 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 RPS15AP27-201ENST00000449183 343 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 MTND2P24-201ENST00000453434 806 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 RPL31P41-201ENST00000477967 372 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 AC126182.1-201ENST00000478134 357 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 RPL23AP84-201ENST00000571193 464 ntBASIC2.88□□□□□ -1.95
SHROOM1Q2M3G4 AC131159.1-201ENST00000621854 213 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms