Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC079780.1-201ENST00000428259 207 ntBASIC1.66□□□□□ -2.14
RFX7Q2KHR2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.66□□□□□ -2.14
RFX7Q2KHR2 AC068135.1-201ENST00000446164 246 ntBASIC1.66□□□□□ -2.14
RFX7Q2KHR2 AC023790.1-201ENST00000482174 347 ntBASIC1.66□□□□□ -2.14
RFX7Q2KHR2 AC104685.1-201ENST00000502445 371 ntBASIC1.66□□□□□ -2.14
RFX7Q2KHR2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.66□□□□□ -2.14
RFX7Q2KHR2 AC079610.2-201ENST00000604818 690 ntBASIC1.66□□□□□ -2.14
RFX7Q2KHR2 AC020658.4-201ENST00000613987 684 ntBASIC1.66□□□□□ -2.14
RFX7Q2KHR2 MIR6734-201ENST00000621166 68 ntBASIC1.66□□□□□ -2.14
RFX7Q2KHR2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.66□□□□□ -2.14
RFX7Q2KHR2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RFX7Q2KHR2 CDC27P3-201ENST00000635418 1910 ntBASIC1.65□□□□□ -2.14
RFX7Q2KHR2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-1-201ENST00000383898 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-42P-201ENST00000384165 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-36P-201ENST00000384172 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-4P-201ENST00000384205 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-5P-201ENST00000384238 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-3P-201ENST00000384314 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-2-201ENST00000384627 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-9-201ENST00000384776 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-33P-201ENST00000384793 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 Z80107.1-201ENST00000436830 412 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC118273.2-201ENST00000532092 465 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC022880.1-201ENST00000534017 973 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 CBX3P2-202ENST00000583365 535 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RN7SL622P-201ENST00000585292 275 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 UBE2L4-201ENST00000587688 464 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 RNU6-6P-201ENST00000606623 107 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC011374.2-201ENST00000607135 526 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC004775.1-201ENST00000607389 753 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AL353770.2-201ENST00000620024 78 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.65□□□□□ -2.15
RFX7Q2KHR2 LINC00216-201ENST00000623548 1126 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 AP003400.5-201ENST00000624827 617 ntBASIC1.65□□□□□ -2.15
RFX7Q2KHR2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 OR4G11P-202ENST00000642116 1414 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC074117.2-201ENST00000417130 397 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 RAD1P2-201ENST00000446414 663 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC107626.1-201ENST00000471084 183 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 RPL30P5-201ENST00000494923 336 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC008676.3-201ENST00000521237 435 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 HAUS1P3-201ENST00000523909 662 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC068338.1-201ENST00000565567 176 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 AC073968.1-201ENST00000618594 637 ntBASIC1.64□□□□□ -2.15
RFX7Q2KHR2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX7Q2KHR2 RNU6-444P-201ENST00000383988 108 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 RNU6-441P-201ENST00000384545 106 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 MIR758-201ENST00000390227 88 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AC092745.2-202ENST00000411880 369 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX7Q2KHR2 MTND2P21-201ENST00000436242 1042 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AL353689.1-201ENST00000438895 199 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 MTND2P19-201ENST00000449129 1012 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AC087884.1-201ENST00000469738 328 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX7Q2KHR2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX7Q2KHR2 AC024595.1-201ENST00000623088 387 ntBASIC1.63□□□□□ -2.15
RFX7Q2KHR2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.63□□□□□ -2.15
RFX7Q2KHR2 Z86062.1-201ENST00000406773 777 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 VN1R108P-201ENST00000431580 830 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 SNRPGP13-201ENST00000442212 177 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.62□□□□□ -2.15
RFX7Q2KHR2 RPL23AP3-201ENST00000453844 468 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 HMGN3P1-201ENST00000453847 193 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 MTCYBP35-201ENST00000503630 1137 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AC008526.1-201ENST00000509149 338 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AC011604.1-201ENST00000545978 196 ntBASIC1.62□□□□□ -2.15
RFX7Q2KHR2 AC023813.2-201ENST00000564321 469 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms