Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AP1B1P2-201ENST00000416196 106 ntBASIC0.88□□□□□ -2.27
HMGN3Q15651 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGN3Q15651 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGN3Q15651 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGN3Q15651 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGN3Q15651 RPL31P60-201ENST00000478450 367 ntBASIC0.88□□□□□ -2.27
HMGN3Q15651 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
HMGN3Q15651 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGN3Q15651 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGN3Q15651 RN7SKP219-201ENST00000516825 296 ntBASIC0.88□□□□□ -2.27
HMGN3Q15651 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGN3Q15651 AP003497.1-201ENST00000528472 562 ntBASIC0.88□□□□□ -2.27
HMGN3Q15651 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.88□□□□□ -2.27
HMGN3Q15651 MIR3126-201ENST00000577443 74 ntBASIC0.88□□□□□ -2.27
HMGN3Q15651 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGN3Q15651 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGN3Q15651 AP000254.1-201ENST00000609934 520 ntBASIC0.88□□□□□ -2.27
HMGN3Q15651 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HMGN3Q15651 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.88□□□□□ -2.27
HMGN3Q15651 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HMGN3Q15651 MFSD8-213ENST00000641134 1327 ntBASIC0.88□□□□□ -2.27
HMGN3Q15651 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.87□□□□□ -2.27
HMGN3Q15651 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.87□□□□□ -2.27
HMGN3Q15651 RNU6-173P-201ENST00000364215 104 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 SNORA8-201ENST00000384574 139 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
HMGN3Q15651 HMGN2P39-201ENST00000398005 273 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AL356421.1-201ENST00000403255 413 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 RN7SKP284-201ENST00000411002 343 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGN3Q15651 AC099677.1-201ENST00000420575 175 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AC099548.1-201ENST00000421443 426 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.87□□□□□ -2.27
HMGN3Q15651 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGN3Q15651 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.87□□□□□ -2.27
HMGN3Q15651 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGN3Q15651 AC092393.1-201ENST00000439625 742 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 RPL39P29-201ENST00000447779 157 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AL589880.1-201ENST00000448271 287 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AC079448.1-201ENST00000449377 373 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AL096803.2-201ENST00000450032 677 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 HMGN2P18-201ENST00000450680 270 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 OR6C72P-201ENST00000451403 892 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGN3Q15651 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.87□□□□□ -2.27
HMGN3Q15651 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.87□□□□□ -2.27
HMGN3Q15651 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGN3Q15651 AC012669.1-201ENST00000603209 283 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AL021997.1-201ENST00000605757 193 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AP002826.1-201ENST00000608835 315 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 MIR6078-201ENST00000611069 100 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AC092140.2-201ENST00000618027 521 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 AC091925.2-201ENST00000625059 256 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 OR5H6-203ENST00000642105 978 ntBASIC0.87□□□□□ -2.27
HMGN3Q15651 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HMGN3Q15651 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
HMGN3Q15651 RNU6-821P-201ENST00000390995 107 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 SSXP10-201ENST00000402595 565 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 RPS12P24-201ENST00000412619 387 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 BTF3P4-201ENST00000418852 495 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 AC092634.2-201ENST00000428146 1010 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 AL590233.1-201ENST00000430017 456 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGN3Q15651 AL022238.1-201ENST00000442557 355 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 MTND6P13-201ENST00000443510 523 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 GDI2P2-201ENST00000445131 608 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGN3Q15651 AC008526.1-201ENST00000509149 338 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.86□□□□□ -2.27
HMGN3Q15651 RNU6-362P-201ENST00000516736 90 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 RNU6-798P-201ENST00000516912 103 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGN3Q15651 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGN3Q15651 AP001542.2-201ENST00000593141 364 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 BNIP3P25-201ENST00000596023 559 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 VN1R80P-201ENST00000597126 338 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGN3Q15651 SNORD114-21-201ENST00000606412 72 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 AC022202.1-201ENST00000613515 211 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 LINC02211-204ENST00000642024 1070 ntBASIC0.86□□□□□ -2.27
HMGN3Q15651 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
HMGN3Q15651 RNU4-51P-201ENST00000364206 140 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 RNU6-1035P-201ENST00000384477 107 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 AL035405.1-201ENST00000400795 710 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 AC004965.1-201ENST00000413033 213 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN3Q15651 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN3Q15651 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.85□□□□□ -2.27
HMGN3Q15651 AL691517.1-201ENST00000440833 1235 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 COX6CP18-201ENST00000448769 222 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN3Q15651 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN3Q15651 RPL30P5-201ENST00000494923 336 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HMGN3Q15651 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN3Q15651 MTCYBP27-201ENST00000555160 670 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 MIR4713-201ENST00000582691 75 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 AC068276.1-201ENST00000605793 379 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms