Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AP003122.3-201ENST00000526316 255 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AC084851.1-201ENST00000529105 249 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AC006199.1-201ENST00000548728 219 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AC021739.1-201ENST00000559631 174 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN1BQ07699 MTCO3P13-201ENST00000577757 781 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AL451007.1-201ENST00000595491 289 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 ELOCP35-201ENST00000604289 336 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AP002360.4-201ENST00000606980 481 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AL589743.7-201ENST00000612637 233 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AC107871.2-201ENST00000612894 502 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AC091931.1-201ENST00000623488 728 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 U6.99-201ENST00000637524 83 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SCN1BQ07699 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SCN1BQ07699 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SCN1BQ07699 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN1BQ07699 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SCN1BQ07699 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN1BQ07699 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN1BQ07699 RNA5SP119-201ENST00000362715 117 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 RNA5SP50-201ENST00000363731 107 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 SNORA62.3-201ENST00000365110 153 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN1BQ07699 MT-TH-201ENST00000387441 69 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 AC107081.1-201ENST00000414975 361 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN1BQ07699 AC137499.1-201ENST00000427602 88 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 ATP5JP1-201ENST00000431631 322 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN1BQ07699 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN1BQ07699 AC233279.1-201ENST00000455300 423 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 TRBV1-201ENST00000476502 284 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.81□□□□□ -1.96
SCN1BQ07699 RNU5F-8P-201ENST00000515941 111 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 RNU6-914P-201ENST00000516749 109 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 RNU6-1183P-201ENST00000517054 60 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN1BQ07699 HSPE1P20-201ENST00000538133 289 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN1BQ07699 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN1BQ07699 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN1BQ07699 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN1BQ07699 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
SCN1BQ07699 MIR3922-201ENST00000585192 84 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN1BQ07699 AF131215.7-201ENST00000602443 707 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 AC244100.1-202ENST00000621554 382 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SCN1BQ07699 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 AC004520.1-201ENST00000608362 1413 ntBASIC2.81□□□□□ -1.96
SCN1BQ07699 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN1BQ07699 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN1BQ07699 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN1BQ07699 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SCN1BQ07699 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN1BQ07699 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCN1BQ07699 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCN1BQ07699 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN1BQ07699 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN1BQ07699 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN1BQ07699 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN1BQ07699 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN1BQ07699 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCN1BQ07699 GNG5P1-201ENST00000255500 204 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 RNU1-70P-201ENST00000362618 164 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 Y_RNA.534-201ENST00000384599 112 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 MIR200C-201ENST00000384980 68 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 BX682237.1-201ENST00000415016 335 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN1BQ07699 SYF2P2-201ENST00000417620 583 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AL139281.1-201ENST00000422120 335 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 CYCSP46-201ENST00000423569 204 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN1BQ07699 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN1BQ07699 OSTCP8-201ENST00000445117 448 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN1BQ07699 AL133547.1-201ENST00000448546 220 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 FABP5P13-201ENST00000452144 328 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 GSTA11P-201ENST00000452866 669 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN1BQ07699 snoU13.22-201ENST00000459428 104 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN1BQ07699 RPL21P10-201ENST00000463521 490 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 EIF4EP3-201ENST00000498782 656 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms