Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AP003072.5-201ENST00000623872 773 ntBASIC1.25□□□□□ -2.21
SCN7AQ01118 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.25□□□□□ -2.21
SCN7AQ01118 AC010889.1-201ENST00000566193 2666 ntBASIC1.25□□□□□ -2.21
SCN7AQ01118 CCT4P2-201ENST00000233836 1548 ntBASIC1.24□□□□□ -2.21
SCN7AQ01118 Y_RNA.62-201ENST00000362840 99 ntBASIC1.24□□□□□ -2.21
SCN7AQ01118 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN7AQ01118 OFD1P18Y-201ENST00000420889 959 ntBASIC1.24□□□□□ -2.21
SCN7AQ01118 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN7AQ01118 AL022400.1-201ENST00000423946 935 ntBASIC1.24□□□□□ -2.21
SCN7AQ01118 ANKRD26P4-201ENST00000455755 950 ntBASIC1.24□□□□□ -2.21
SCN7AQ01118 AGGF1P5-201ENST00000567900 919 ntBASIC1.24□□□□□ -2.21
SCN7AQ01118 AC008749.1-201ENST00000597650 306 ntBASIC1.24□□□□□ -2.21
SCN7AQ01118 AC211469.2-201ENST00000605461 205 ntBASIC1.24□□□□□ -2.21
SCN7AQ01118 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN7AQ01118 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.23□□□□□ -2.21
SCN7AQ01118 RNU6-1249P-201ENST00000363237 111 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 RNU4-42P-201ENST00000364738 142 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 Y_RNA.295-201ENST00000364918 102 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 MTCO3P46-201ENST00000425787 232 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN7AQ01118 AL445305.1-201ENST00000432577 575 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN7AQ01118 RPS27P26-201ENST00000494583 239 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 PCNAP1-201ENST00000505363 709 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.23□□□□□ -2.21
SCN7AQ01118 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN7AQ01118 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN7AQ01118 AC079148.1-201ENST00000565944 819 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 MIR3973-201ENST00000579824 107 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 ZNF92P3-201ENST00000596594 954 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 UCA1.1-201ENST00000620952 75 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 AC087359.1-201ENST00000508335 1740 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN7AQ01118 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SCN7AQ01118 SNORA3A-201ENST00000364113 130 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 AP002784.2-201ENST00000397300 549 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 AL591212.2-201ENST00000433923 257 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 AC009296.1-201ENST00000443146 155 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 AC097493.1-201ENST00000463958 372 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN7AQ01118 EIF4EP5-201ENST00000528228 640 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 CR383656.8-201ENST00000549046 145 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 XIAPP1-201ENST00000603162 600 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 AC091932.3-201ENST00000624223 323 ntBASIC1.23□□□□□ -2.21
SCN7AQ01118 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
SCN7AQ01118 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.22□□□□□ -2.21
SCN7AQ01118 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SCN7AQ01118 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.22□□□□□ -2.21
SCN7AQ01118 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.22□□□□□ -2.21
SCN7AQ01118 AL583843.1-201ENST00000456070 346 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 CABYRP1-201ENST00000465493 1045 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 OR9N1P-202ENST00000494289 481 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 EIF4EP3-201ENST00000498782 656 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 AC096751.1-202ENST00000502691 1067 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 AC096745.1-201ENST00000509945 370 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 RNA5SP436-201ENST00000516020 115 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.22□□□□□ -2.21
SCN7AQ01118 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN7AQ01118 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SCN7AQ01118 SDR42E1P2-201ENST00000614861 481 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 AC079395.3-201ENST00000615161 484 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 SDR42E1P4-201ENST00000620894 481 ntBASIC1.22□□□□□ -2.21
SCN7AQ01118 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
SCN7AQ01118 RNU4-31P-201ENST00000384211 141 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 AL513475.1-201ENST00000406602 315 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 TATDN1P1-201ENST00000414123 891 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 AC008850.1-201ENST00000427546 362 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SCN7AQ01118 PABPC1P3-201ENST00000469174 459 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.21□□□□□ -2.22
SCN7AQ01118 AC023825.1-201ENST00000566704 1030 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 AC078899.2-201ENST00000595282 212 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 AC103810.9-201ENST00000606688 112 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 AL627230.6-201ENST00000611129 280 ntBASIC1.21□□□□□ -2.22
SCN7AQ01118 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
SCN7AQ01118 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
SCN7AQ01118 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.2□□□□□ -2.22
SCN7AQ01118 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SCN7AQ01118 RNU11-5P-201ENST00000391216 129 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.2□□□□□ -2.22
SCN7AQ01118 AC079780.1-201ENST00000428259 207 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 RPS15AP27-201ENST00000449183 343 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 BUD31P2-201ENST00000449374 300 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 HSPE1P24-201ENST00000450782 238 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 SNORD97-201ENST00000459187 142 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN7AQ01118 AC020699.1-201ENST00000505161 445 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 RNU6-1004P-201ENST00000516584 111 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 CBX3P8-201ENST00000532412 525 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 CBX3P7-201ENST00000532876 502 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 CYP3A137P-201ENST00000562436 69 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.2□□□□□ -2.22
SCN7AQ01118 AL109918.3-201ENST00000603072 338 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 AC106900.2-201ENST00000604994 317 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 AC005021.1-201ENST00000608730 355 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 AC092140.2-201ENST00000618027 521 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.2□□□□□ -2.22
SCN7AQ01118 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms