Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AC068254.2-201ENST00000623938 3577 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP1Q00587 SNORA63.1-201ENST00000362493 131 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 SNORD9-201ENST00000362566 104 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 Y_RNA.166-201ENST00000363730 102 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 SNORD81.2-201ENST00000365153 76 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 Y_RNA.373-201ENST00000365600 103 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 RNU6-14P-201ENST00000384630 106 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 MIR34B-201ENST00000385076 84 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDC42EP1Q00587 RNU6-817P-201ENST00000391083 104 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 RNU6-510P-201ENST00000391239 108 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 LAP3P1-201ENST00000403648 294 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 RNU6-1148P-201ENST00000410992 104 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 PDCL2P1-201ENST00000419302 352 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 MTCO3P46-201ENST00000425787 232 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 MTND4P28-201ENST00000426217 387 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4□□□□□ -1.77
CDC42EP1Q00587 AL365400.1-201ENST00000431854 640 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4□□□□□ -1.77
CDC42EP1Q00587 UBE2V1P7-201ENST00000446395 340 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4□□□□□ -1.77
CDC42EP1Q00587 AC004801.2-202ENST00000463559 283 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4□□□□□ -1.77
CDC42EP1Q00587 TRBV1-201ENST00000476502 284 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 ALDH7A1P3-201ENST00000492517 345 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 RNU6-579P-201ENST00000516879 102 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 RPL7P20-201ENST00000520308 745 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4□□□□□ -1.77
CDC42EP1Q00587 AC087241.2-201ENST00000535801 324 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 AL118558.2-201ENST00000556294 238 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4□□□□□ -1.77
CDC42EP1Q00587 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4□□□□□ -1.77
CDC42EP1Q00587 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4□□□□□ -1.77
CDC42EP1Q00587 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4□□□□□ -1.77
CDC42EP1Q00587 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4□□□□□ -1.77
CDC42EP1Q00587 AC069200.1-201ENST00000609511 323 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 AC015813.4-201ENST00000610469 179 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 AL355810.1-201ENST00000614629 552 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 MIR4727-201ENST00000622232 55 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4□□□□□ -1.77
CDC42EP1Q00587 MTND5P42-201ENST00000637720 498 ntBASIC4□□□□□ -1.77
CDC42EP1Q00587 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4□□□□□ -1.77
CDC42EP1Q00587 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP1Q00587 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP1Q00587 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CDC42EP1Q00587 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP1Q00587 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP1Q00587 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 Y_RNA.100-201ENST00000363141 102 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 MIR514A1-201ENST00000385133 98 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 CISD1P1-201ENST00000393907 327 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 HSPE1P8-201ENST00000406997 288 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AL160275.2-201ENST00000412010 394 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AL353678.1-201ENST00000422735 741 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AL591212.2-201ENST00000433923 257 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AC104058.1-201ENST00000448028 297 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AC092001.1-201ENST00000453012 261 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 RBMY2UP-201ENST00000453474 324 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 RN7SKP13-201ENST00000515933 244 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 SNORA31.3-201ENST00000516029 96 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 PSMA3P-201ENST00000555485 635 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AC037471.2-201ENST00000564941 598 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AC092807.2-201ENST00000609367 243 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AL359697.1-201ENST00000624879 587 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AC112487.2-201ENST00000637950 304 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 AL732372.2-225ENST00000642124 456 ntBASIC3.99□□□□□ -1.77
CDC42EP1Q00587 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP1Q00587 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDC42EP1Q00587 Y_RNA.11-201ENST00000362375 109 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 SNORD46.1-201ENST00000364139 104 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 RNU6-522P-201ENST00000364497 107 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 Y_RNA.378-201ENST00000365652 113 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 Y_RNA.529-201ENST00000384586 119 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 MIR183-201ENST00000384958 110 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 AL356432.1-201ENST00000405809 419 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 RN7SKP32-201ENST00000410167 303 ntBASIC3.98□□□□□ -1.77
CDC42EP1Q00587 RN7SKP177-201ENST00000410567 355 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms