Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.07□□□□□ -1.92
CDK3Q00526 HMGB1P27-201ENST00000431429 603 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 RPS24P1-201ENST00000438550 371 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 Z82210.1-201ENST00000440037 231 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AC013267.1-201ENST00000458227 267 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AP002884.2-201ENST00000471647 395 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AC008885.1-201ENST00000514930 301 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.07□□□□□ -1.92
CDK3Q00526 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.07□□□□□ -1.92
CDK3Q00526 ATP5F1P5-201ENST00000526403 760 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.07□□□□□ -1.92
CDK3Q00526 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK3Q00526 RPS3AP4-201ENST00000555161 764 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.07□□□□□ -1.92
CDK3Q00526 AC034105.3-201ENST00000565294 442 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 GLUD1P4-201ENST00000590914 418 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AC087683.1-201ENST00000591187 441 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AC079089.3-201ENST00000603094 673 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AC073648.5-201ENST00000603502 305 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AL161729.4-201ENST00000604650 476 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AL139286.2-201ENST00000606838 396 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AC091834.1-201ENST00000614543 472 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK3Q00526 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CDK3Q00526 AC091152.2-201ENST00000591628 2569 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
CDK3Q00526 SNORA54-201ENST00000384281 123 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 MIR23A-201ENST00000385245 73 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AC096664.2-201ENST00000411843 406 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.06□□□□□ -1.92
CDK3Q00526 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.06□□□□□ -1.92
CDK3Q00526 MORF4L1P6-201ENST00000418771 268 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AC012498.1-201ENST00000424037 437 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 DLGAP5P1-201ENST00000430307 464 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AL358934.1-201ENST00000432346 324 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CDK3Q00526 HMGB3P12-201ENST00000438745 556 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 BNIP3P2-201ENST00000441221 577 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AC079448.1-201ENST00000449377 373 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.06□□□□□ -1.92
CDK3Q00526 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.06□□□□□ -1.92
CDK3Q00526 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CDK3Q00526 RNU6-420P-201ENST00000458780 107 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 RPL37P6-201ENST00000460682 294 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.06□□□□□ -1.92
CDK3Q00526 RPL7P5-201ENST00000471472 736 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
CDK3Q00526 AC004924.1-201ENST00000480160 781 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AL160314.1-201ENST00000490836 438 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDK3Q00526 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.06□□□□□ -1.92
CDK3Q00526 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.06□□□□□ -1.92
CDK3Q00526 RNU6-1282P-201ENST00000516735 96 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AP002404.1-201ENST00000532005 451 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDK3Q00526 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDK3Q00526 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.06□□□□□ -1.92
CDK3Q00526 MIR3609-201ENST00000582661 80 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.06□□□□□ -1.92
CDK3Q00526 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.06□□□□□ -1.92
CDK3Q00526 AC007363.1-201ENST00000604736 620 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 AC005332.10-201ENST00000612725 619 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.06□□□□□ -1.92
CDK3Q00526 LRRC77P-213ENST00000637727 880 ntBASIC3.06□□□□□ -1.92
CDK3Q00526 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDK3Q00526 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDK3Q00526 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK3Q00526 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDK3Q00526 AC073343.1-201ENST00000328239 651 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 RNU6-960P-201ENST00000364056 120 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.05□□□□□ -1.92
CDK3Q00526 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK3Q00526 AL139397.2-201ENST00000404529 772 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDK3Q00526 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDK3Q00526 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK3Q00526 PIGFP2-201ENST00000421400 651 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 AC104651.1-201ENST00000427559 735 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDK3Q00526 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.05□□□□□ -1.92
CDK3Q00526 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
CDK3Q00526 AC087588.1-201ENST00000462203 316 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 S100A11P2-201ENST00000467589 312 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 HMGN2P13-201ENST00000476476 274 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 RPS4XP22-201ENST00000480755 780 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 SNORA31.3-201ENST00000516029 96 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 RNU1-143P-201ENST00000516296 146 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 SCARNA24.1-201ENST00000516465 137 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 RNU6-405P-201ENST00000516637 110 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 RNU6-928P-201ENST00000516876 104 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 RNA5SP290-201ENST00000517133 127 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 RNU6-711P-201ENST00000517255 106 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 MTCO2P4-201ENST00000517968 247 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 AC104027.1-201ENST00000521887 300 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 AP003392.2-201ENST00000527269 208 ntBASIC3.05□□□□□ -1.92
CDK3Q00526 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.05□□□□□ -1.92
CDK3Q00526 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms