Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SNORA40.14-201ENST00000516543 86 ntBASIC4.33□□□□□ -1.72
YBX1P67809 AC090151.1-201ENST00000520784 730 ntBASIC4.33□□□□□ -1.72
YBX1P67809 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.33□□□□□ -1.72
YBX1P67809 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.33□□□□□ -1.72
YBX1P67809 OR5D17P-201ENST00000531492 978 ntBASIC4.33□□□□□ -1.72
YBX1P67809 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
YBX1P67809 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.33□□□□□ -1.72
YBX1P67809 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.33□□□□□ -1.72
YBX1P67809 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.33□□□□□ -1.72
YBX1P67809 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.33□□□□□ -1.72
YBX1P67809 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.33□□□□□ -1.72
YBX1P67809 AC007619.2-201ENST00000605743 379 ntBASIC4.33□□□□□ -1.72
YBX1P67809 HMGB1P50-201ENST00000605814 607 ntBASIC4.33□□□□□ -1.72
YBX1P67809 AC096772.1-201ENST00000609146 564 ntBASIC4.33□□□□□ -1.72
YBX1P67809 MIR6891-201ENST00000618788 93 ntBASIC4.33□□□□□ -1.72
YBX1P67809 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.33□□□□□ -1.72
YBX1P67809 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.33□□□□□ -1.72
YBX1P67809 AC008669.1-201ENST00000565823 2178 ntBASIC4.33□□□□□ -1.72
YBX1P67809 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
YBX1P67809 AC139769.1-204ENST00000472297 1931 ntBASIC4.33□□□□□ -1.72
YBX1P67809 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
YBX1P67809 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.32□□□□□ -1.72
YBX1P67809 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
YBX1P67809 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.32□□□□□ -1.72
YBX1P67809 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
YBX1P67809 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.32□□□□□ -1.72
YBX1P67809 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
YBX1P67809 Y_RNA.14-201ENST00000362415 103 ntBASIC4.32□□□□□ -1.72
YBX1P67809 Y_RNA.48-201ENST00000362710 103 ntBASIC4.32□□□□□ -1.72
YBX1P67809 RNU6-989P-201ENST00000362756 107 ntBASIC4.32□□□□□ -1.72
YBX1P67809 Y_RNA.117-201ENST00000363294 101 ntBASIC4.32□□□□□ -1.72
YBX1P67809 RNU6-288P-201ENST00000363690 104 ntBASIC4.32□□□□□ -1.72
YBX1P67809 RNU6-1329P-201ENST00000365664 107 ntBASIC4.32□□□□□ -1.72
YBX1P67809 Y_RNA.577-201ENST00000384794 101 ntBASIC4.32□□□□□ -1.72
YBX1P67809 MIR23B-201ENST00000384832 97 ntBASIC4.32□□□□□ -1.72
YBX1P67809 TMSB10P2-201ENST00000416049 131 ntBASIC4.32□□□□□ -1.72
YBX1P67809 AC108032.1-201ENST00000416706 207 ntBASIC4.32□□□□□ -1.72
YBX1P67809 RBMY1KP-201ENST00000423480 476 ntBASIC4.32□□□□□ -1.72
YBX1P67809 AL160275.3-201ENST00000423876 471 ntBASIC4.32□□□□□ -1.72
YBX1P67809 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.32□□□□□ -1.72
YBX1P67809 RPL23AP33-201ENST00000442301 452 ntBASIC4.32□□□□□ -1.72
YBX1P67809 AC012671.1-201ENST00000451912 203 ntBASIC4.32□□□□□ -1.72
YBX1P67809 OR2AQ1P-201ENST00000451972 200 ntBASIC4.32□□□□□ -1.72
YBX1P67809 RPL23AP31-201ENST00000456160 467 ntBASIC4.32□□□□□ -1.72
YBX1P67809 AC022795.1-201ENST00000473808 480 ntBASIC4.32□□□□□ -1.72
YBX1P67809 RPL21P129-201ENST00000491732 478 ntBASIC4.32□□□□□ -1.72
YBX1P67809 HMGB1P35-201ENST00000503360 598 ntBASIC4.32□□□□□ -1.72
YBX1P67809 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.32□□□□□ -1.72
YBX1P67809 RNU6-1023P-201ENST00000516137 106 ntBASIC4.32□□□□□ -1.72
YBX1P67809 RNU6-352P-201ENST00000516908 107 ntBASIC4.32□□□□□ -1.72
YBX1P67809 IGLVIV-65-201ENST00000517313 360 ntBASIC4.32□□□□□ -1.72
YBX1P67809 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.32□□□□□ -1.72
YBX1P67809 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.32□□□□□ -1.72
YBX1P67809 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.32□□□□□ -1.72
YBX1P67809 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.32□□□□□ -1.72
YBX1P67809 AL590392.1-201ENST00000604960 446 ntBASIC4.32□□□□□ -1.72
YBX1P67809 AC012603.1-201ENST00000606424 528 ntBASIC4.32□□□□□ -1.72
YBX1P67809 SNX18P1Y-201ENST00000616231 511 ntBASIC4.32□□□□□ -1.72
YBX1P67809 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
YBX1P67809 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
YBX1P67809 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
YBX1P67809 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
YBX1P67809 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
YBX1P67809 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
YBX1P67809 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
YBX1P67809 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
YBX1P67809 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 Y_RNA.64-201ENST00000362845 102 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RNY3P11-201ENST00000364153 102 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RNU4-42P-201ENST00000364738 142 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RNA5SP479-201ENST00000364858 117 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RNU1-63P-201ENST00000383902 164 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RNU6-790P-201ENST00000384479 105 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RNU6-821P-201ENST00000390995 107 ntBASIC4.31□□□□□ -1.72
YBX1P67809 AC110754.1-201ENST00000399740 601 ntBASIC4.31□□□□□ -1.72
YBX1P67809 MIR548M-201ENST00000408260 86 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.31□□□□□ -1.72
YBX1P67809 MTND4LP30-201ENST00000454092 297 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RPL39P38-201ENST00000467018 153 ntBASIC4.31□□□□□ -1.72
YBX1P67809 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.31□□□□□ -1.72
YBX1P67809 RPL7P23-201ENST00000493874 747 ntBASIC4.31□□□□□ -1.72
YBX1P67809 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.31□□□□□ -1.72
YBX1P67809 MTND1P19-201ENST00000511780 315 ntBASIC4.31□□□□□ -1.72
YBX1P67809 HIGD1AP3-201ENST00000515857 278 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RN7SKP122-201ENST00000515923 296 ntBASIC4.31□□□□□ -1.72
YBX1P67809 AC069113.1-201ENST00000517763 267 ntBASIC4.31□□□□□ -1.72
YBX1P67809 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.31□□□□□ -1.72
YBX1P67809 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.31□□□□□ -1.72
YBX1P67809 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 AL137100.2-201ENST00000555786 315 ntBASIC4.31□□□□□ -1.72
YBX1P67809 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
YBX1P67809 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms