Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC016769.3-201ENST00000396562 315 ntBASIC1.17□□□□□ -2.22
UBA52P62987 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.17□□□□□ -2.22
UBA52P62987 RPL27AP8-201ENST00000424277 446 ntBASIC1.17□□□□□ -2.22
UBA52P62987 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.17□□□□□ -2.22
UBA52P62987 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.17□□□□□ -2.22
UBA52P62987 USP9YP34-201ENST00000453983 808 ntBASIC1.17□□□□□ -2.22
UBA52P62987 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
UBA52P62987 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.17□□□□□ -2.22
UBA52P62987 AC084033.1-201ENST00000550830 633 ntBASIC1.17□□□□□ -2.22
UBA52P62987 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.17□□□□□ -2.22
UBA52P62987 WISP1-OT1-201ENST00000602893 642 ntBASIC1.17□□□□□ -2.22
UBA52P62987 AL161722.3-201ENST00000605789 2983 ntBASIC1.17□□□□□ -2.22
UBA52P62987 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.16□□□□□ -2.22
UBA52P62987 AL589655.1-201ENST00000405398 482 ntBASIC1.16□□□□□ -2.22
UBA52P62987 AL356131.1-201ENST00000405826 414 ntBASIC1.16□□□□□ -2.22
UBA52P62987 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.16□□□□□ -2.22
UBA52P62987 UBE2FP1-201ENST00000416536 447 ntBASIC1.16□□□□□ -2.22
UBA52P62987 HMGB1P49-201ENST00000418882 569 ntBASIC1.16□□□□□ -2.22
UBA52P62987 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UBA52P62987 GTF2IP7-202ENST00000436677 309 ntBASIC1.16□□□□□ -2.22
UBA52P62987 AC244505.5-201ENST00000443639 207 ntBASIC1.16□□□□□ -2.22
UBA52P62987 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.16□□□□□ -2.22
UBA52P62987 AC080013.2-201ENST00000460866 323 ntBASIC1.16□□□□□ -2.22
UBA52P62987 RNA5SP102-201ENST00000516865 106 ntBASIC1.16□□□□□ -2.22
UBA52P62987 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.16□□□□□ -2.22
UBA52P62987 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.16□□□□□ -2.22
UBA52P62987 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
UBA52P62987 AP002791.1-201ENST00000623291 381 ntBASIC1.16□□□□□ -2.22
UBA52P62987 AL359740.1-201ENST00000624340 592 ntBASIC1.16□□□□□ -2.22
UBA52P62987 AC091895.1-201ENST00000624494 256 ntBASIC1.16□□□□□ -2.22
UBA52P62987 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.16□□□□□ -2.22
UBA52P62987 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UBA52P62987 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.15□□□□□ -2.22
UBA52P62987 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
UBA52P62987 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.22
UBA52P62987 MTND5P35-201ENST00000557537 1720 ntBASIC1.15□□□□□ -2.22
UBA52P62987 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
UBA52P62987 RPL23AP29-201ENST00000397284 453 ntBASIC1.15□□□□□ -2.23
UBA52P62987 AL136372.1-201ENST00000403060 228 ntBASIC1.15□□□□□ -2.23
UBA52P62987 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.15□□□□□ -2.23
UBA52P62987 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.15□□□□□ -2.23
UBA52P62987 OR6C72P-201ENST00000451403 892 ntBASIC1.15□□□□□ -2.23
UBA52P62987 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.15□□□□□ -2.23
UBA52P62987 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
UBA52P62987 RNU5F-8P-201ENST00000515941 111 ntBASIC1.15□□□□□ -2.23
UBA52P62987 AC008676.3-201ENST00000521237 435 ntBASIC1.15□□□□□ -2.23
UBA52P62987 AC092470.1-201ENST00000546187 132 ntBASIC1.15□□□□□ -2.23
UBA52P62987 AC068135.2-201ENST00000569293 1028 ntBASIC1.15□□□□□ -2.23
UBA52P62987 MIR4452-201ENST00000583004 71 ntBASIC1.15□□□□□ -2.23
UBA52P62987 SNORA4-201ENST00000584302 138 ntBASIC1.15□□□□□ -2.23
UBA52P62987 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.15□□□□□ -2.23
UBA52P62987 AC005021.1-201ENST00000608730 355 ntBASIC1.15□□□□□ -2.23
UBA52P62987 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.15□□□□□ -2.23
UBA52P62987 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
UBA52P62987 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.14□□□□□ -2.23
UBA52P62987 RNU6-452P-201ENST00000384406 107 ntBASIC1.14□□□□□ -2.23
UBA52P62987 RNY1P14-201ENST00000384426 108 ntBASIC1.14□□□□□ -2.23
UBA52P62987 AC023512.1-201ENST00000444513 499 ntBASIC1.14□□□□□ -2.23
UBA52P62987 RPL31P58-201ENST00000469001 379 ntBASIC1.14□□□□□ -2.23
UBA52P62987 RPL30P5-201ENST00000494923 336 ntBASIC1.14□□□□□ -2.23
UBA52P62987 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.14□□□□□ -2.23
UBA52P62987 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.14□□□□□ -2.23
UBA52P62987 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.14□□□□□ -2.23
UBA52P62987 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.14□□□□□ -2.23
UBA52P62987 AL133241.1-201ENST00000556832 487 ntBASIC1.14□□□□□ -2.23
UBA52P62987 uc_338.12-201ENST00000616344 181 ntBASIC1.14□□□□□ -2.23
UBA52P62987 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.14□□□□□ -2.23
UBA52P62987 AC073308.1-201ENST00000623696 305 ntBASIC1.14□□□□□ -2.23
UBA52P62987 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBA52P62987 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
UBA52P62987 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UBA52P62987 AP000560.1-201ENST00000624150 1937 ntBASIC1.13□□□□□ -2.23
UBA52P62987 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
UBA52P62987 Y_RNA.466-201ENST00000384294 113 ntBASIC1.13□□□□□ -2.23
UBA52P62987 RNU6-821P-201ENST00000390995 107 ntBASIC1.13□□□□□ -2.23
UBA52P62987 RPL21P1-201ENST00000399532 476 ntBASIC1.13□□□□□ -2.23
UBA52P62987 RNU2-41P-201ENST00000410991 178 ntBASIC1.13□□□□□ -2.23
UBA52P62987 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.13□□□□□ -2.23
UBA52P62987 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UBA52P62987 Z85994.2-201ENST00000434327 452 ntBASIC1.13□□□□□ -2.23
UBA52P62987 SNRPGP13-201ENST00000442212 177 ntBASIC1.13□□□□□ -2.23
UBA52P62987 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.13□□□□□ -2.23
UBA52P62987 RNU6-420P-201ENST00000458780 107 ntBASIC1.13□□□□□ -2.23
UBA52P62987 KATNBL1P4-201ENST00000503545 918 ntBASIC1.13□□□□□ -2.23
UBA52P62987 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.13□□□□□ -2.23
UBA52P62987 ATP5EP1-201ENST00000510257 156 ntBASIC1.13□□□□□ -2.23
UBA52P62987 MIR892C-201ENST00000516410 77 ntBASIC1.13□□□□□ -2.23
UBA52P62987 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
UBA52P62987 CBX3P2-202ENST00000583365 535 ntBASIC1.13□□□□□ -2.23
UBA52P62987 AC013468.1-201ENST00000608680 598 ntBASIC1.13□□□□□ -2.23
UBA52P62987 AC025048.6-202ENST00000627667 438 ntBASIC1.13□□□□□ -2.23
UBA52P62987 MTND2P41-201ENST00000637599 773 ntBASIC1.13□□□□□ -2.23
UBA52P62987 LINC02211-204ENST00000642024 1070 ntBASIC1.13□□□□□ -2.23
UBA52P62987 OR4G11P-202ENST00000642116 1414 ntBASIC1.13□□□□□ -2.23
UBA52P62987 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
UBA52P62987 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
UBA52P62987 U8.1-201ENST00000362843 134 ntBASIC1.12□□□□□ -2.23
UBA52P62987 RNU6-173P-201ENST00000364215 104 ntBASIC1.12□□□□□ -2.23
UBA52P62987 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
UBA52P62987 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms