Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SETP8-201ENST00000435341 628 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC091179.1-201ENST00000461606 579 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC026436.1-201ENST00000510537 270 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGCS2P54868 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC123904.3-201ENST00000547218 814 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 MED28P6-201ENST00000558776 231 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 MIR4769-201ENST00000584126 77 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 Z94722.1-201ENST00000604328 474 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AL031176.1-201ENST00000604554 466 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 BNIP3P10-201ENST00000605360 577 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AC105129.3-201ENST00000605455 485 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.81□□□□□ -1.96
HMGCS2P54868 AC093783.1-201ENST00000612976 329 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AC104010.1-201ENST00000616889 150 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AC012150.2-201ENST00000621300 544 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 AC008443.7-201ENST00000622195 246 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 CRYM-AS1-204ENST00000637983 556 ntBASIC2.81□□□□□ -1.96
HMGCS2P54868 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HMGCS2P54868 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
HMGCS2P54868 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS2P54868 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS2P54868 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS2P54868 RNU4-40P-201ENST00000364351 143 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 DYNLT3P1-201ENST00000378574 347 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 RNU6-1027P-201ENST00000383998 107 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HMGCS2P54868 BTF3P7-201ENST00000407097 488 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 NDUFB4P5-201ENST00000415445 361 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS2P54868 BEND7P1-201ENST00000422058 457 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 AC003685.2-201ENST00000422795 395 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC244035.1-201ENST00000430042 390 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 RPL37P21-201ENST00000435890 276 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 THAP5P1-201ENST00000439089 262 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 MTND1P30-201ENST00000441241 901 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS2P54868 MTCO1P42-201ENST00000457379 726 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 RPL36AP51-201ENST00000487216 318 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 AC034222.1-201ENST00000494052 532 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 AC092436.1-201ENST00000506450 503 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC117522.2-201ENST00000510049 657 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS2P54868 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS2P54868 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS2P54868 MIR1273D-201ENST00000577266 86 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC012119.1-201ENST00000603184 222 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AP002826.1-201ENST00000608835 315 ntBASIC2.8□□□□□ -1.96
HMGCS2P54868 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS2P54868 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS2P54868 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGCS2P54868 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HMGCS2P54868 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.8□□□□□ -1.96
HMGCS2P54868 AC011460.1-201ENST00000636268 1834 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS2P54868 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCS2P54868 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCS2P54868 AL513185.3-201ENST00000433335 1300 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 RNU6-114P-201ENST00000384704 105 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 MIR1289-2-201ENST00000408360 111 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 RPL27AP8-201ENST00000424277 446 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS2P54868 TOMM20P4-201ENST00000427861 435 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS2P54868 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS2P54868 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS2P54868 AC244505.4-201ENST00000434905 287 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.79□□□□□ -1.96
HMGCS2P54868 SSXP5-201ENST00000443473 287 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 BMI1P1-201ENST00000445879 941 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS2P54868 AL122001.1-201ENST00000457027 370 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS2P54868 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.79□□□□□ -1.96
HMGCS2P54868 DNAJC8P1-201ENST00000554535 372 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 PIGPP4-201ENST00000584447 307 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGCS2P54868 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGCS2P54868 AC012065.4-201ENST00000602445 679 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 AL358072.1-201ENST00000604156 575 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 AC091965.4-201ENST00000607691 587 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 AC107871.2-201ENST00000612894 502 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms