Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COPAP53621 AC079684.1-201ENST00000621405 437 ntBASIC3.81□□□□□ -1.8
COPAP53621 YWHAEP7-203ENST00000622054 312 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC093648.1-201ENST00000623546 606 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC110774.1-201ENST00000623567 2018 ntBASIC3.81□□□□□ -1.8
COPAP53621 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.81□□□□□ -1.8
COPAP53621 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COPAP53621 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COPAP53621 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.81□□□□□ -1.8
COPAP53621 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPAP53621 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPAP53621 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COPAP53621 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPAP53621 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COPAP53621 Y_RNA.38-201ENST00000362617 102 ntBASIC3.8□□□□□ -1.8
COPAP53621 SNORA62.1-201ENST00000364287 154 ntBASIC3.8□□□□□ -1.8
COPAP53621 Y_RNA.333-201ENST00000365274 102 ntBASIC3.8□□□□□ -1.8
COPAP53621 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
COPAP53621 RNU6-946P-201ENST00000383878 107 ntBASIC3.8□□□□□ -1.8
COPAP53621 SNORA69-201ENST00000383895 132 ntBASIC3.8□□□□□ -1.8
COPAP53621 RNY3P14-201ENST00000384309 102 ntBASIC3.8□□□□□ -1.8
COPAP53621 MIR183-201ENST00000384958 110 ntBASIC3.8□□□□□ -1.8
COPAP53621 SNORA11.1-201ENST00000408133 129 ntBASIC3.8□□□□□ -1.8
COPAP53621 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.8□□□□□ -1.8
COPAP53621 RPS29P4-201ENST00000414733 161 ntBASIC3.8□□□□□ -1.8
COPAP53621 SNRPEP10-201ENST00000420249 274 ntBASIC3.8□□□□□ -1.8
COPAP53621 AL451054.2-201ENST00000420896 202 ntBASIC3.8□□□□□ -1.8
COPAP53621 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.8□□□□□ -1.8
COPAP53621 AL356867.1-201ENST00000429623 299 ntBASIC3.8□□□□□ -1.8
COPAP53621 GTF2IP20-201ENST00000431663 360 ntBASIC3.8□□□□□ -1.8
COPAP53621 HIGD1AP11-201ENST00000438361 280 ntBASIC3.8□□□□□ -1.8
COPAP53621 CALM1P1-201ENST00000442082 433 ntBASIC3.8□□□□□ -1.8
COPAP53621 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COPAP53621 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.8□□□□□ -1.8
COPAP53621 MRPS17P3-201ENST00000465453 385 ntBASIC3.8□□□□□ -1.8
COPAP53621 RPL31P60-201ENST00000478450 367 ntBASIC3.8□□□□□ -1.8
COPAP53621 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.8□□□□□ -1.8
COPAP53621 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
COPAP53621 AC069439.1-201ENST00000494739 167 ntBASIC3.8□□□□□ -1.8
COPAP53621 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.8□□□□□ -1.8
COPAP53621 AC074344.1-201ENST00000512823 224 ntBASIC3.8□□□□□ -1.8
COPAP53621 NRON-201ENST00000517270 370 ntBASIC3.8□□□□□ -1.8
COPAP53621 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.8□□□□□ -1.8
COPAP53621 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.8□□□□□ -1.8
COPAP53621 AP001804.3-201ENST00000525146 880 ntBASIC3.8□□□□□ -1.8
COPAP53621 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.8□□□□□ -1.8
COPAP53621 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.8□□□□□ -1.8
COPAP53621 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.8□□□□□ -1.8
COPAP53621 AC002545.1-201ENST00000592511 181 ntBASIC3.8□□□□□ -1.8
COPAP53621 AC010591.1-201ENST00000603941 649 ntBASIC3.8□□□□□ -1.8
COPAP53621 AC012468.1-201ENST00000604888 430 ntBASIC3.8□□□□□ -1.8
COPAP53621 SNORA62.6-201ENST00000606322 83 ntBASIC3.8□□□□□ -1.8
COPAP53621 AL355073.2-201ENST00000612106 557 ntBASIC3.8□□□□□ -1.8
COPAP53621 AL354950.2-201ENST00000617939 290 ntBASIC3.8□□□□□ -1.8
COPAP53621 AC007998.5-201ENST00000622938 237 ntBASIC3.8□□□□□ -1.8
COPAP53621 U6.114-201ENST00000636407 96 ntBASIC3.8□□□□□ -1.8
COPAP53621 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.8□□□□□ -1.8
COPAP53621 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COPAP53621 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COPAP53621 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
COPAP53621 MTND5P17-201ENST00000418405 1603 ntBASIC3.8□□□□□ -1.8
COPAP53621 AL137003.2-201ENST00000606924 2538 ntBASIC3.8□□□□□ -1.8
COPAP53621 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
COPAP53621 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPAP53621 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
COPAP53621 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COPAP53621 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.79□□□□□ -1.8
COPAP53621 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
COPAP53621 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPAP53621 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
COPAP53621 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
COPAP53621 Y_RNA.390-201ENST00000383932 102 ntBASIC3.79□□□□□ -1.8
COPAP53621 SNORA24.1-201ENST00000384401 135 ntBASIC3.79□□□□□ -1.8
COPAP53621 FGF7P8-201ENST00000402994 292 ntBASIC3.79□□□□□ -1.8
COPAP53621 RNU6-908P-201ENST00000410160 94 ntBASIC3.79□□□□□ -1.8
COPAP53621 AL513331.1-201ENST00000411908 397 ntBASIC3.79□□□□□ -1.8
COPAP53621 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.79□□□□□ -1.8
COPAP53621 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.79□□□□□ -1.8
COPAP53621 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.79□□□□□ -1.8
COPAP53621 YPEL5P1-201ENST00000419731 367 ntBASIC3.79□□□□□ -1.8
COPAP53621 HMGB1P27-201ENST00000431429 603 ntBASIC3.79□□□□□ -1.8
COPAP53621 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COPAP53621 FABP5P13-201ENST00000452144 328 ntBASIC3.79□□□□□ -1.8
COPAP53621 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.79□□□□□ -1.8
COPAP53621 RNU7-182P-201ENST00000459009 62 ntBASIC3.79□□□□□ -1.8
COPAP53621 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.79□□□□□ -1.8
COPAP53621 AC108078.2-201ENST00000510750 236 ntBASIC3.79□□□□□ -1.8
COPAP53621 AC105417.1-201ENST00000514691 285 ntBASIC3.79□□□□□ -1.8
COPAP53621 RN7SKP18-201ENST00000516005 275 ntBASIC3.79□□□□□ -1.8
COPAP53621 RN7SKP209-201ENST00000516888 304 ntBASIC3.79□□□□□ -1.8
COPAP53621 OR5BN1P-201ENST00000532955 829 ntBASIC3.79□□□□□ -1.8
COPAP53621 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.79□□□□□ -1.8
COPAP53621 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.79□□□□□ -1.8
COPAP53621 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.79□□□□□ -1.8
COPAP53621 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.79□□□□□ -1.8
COPAP53621 AC007619.2-201ENST00000605743 379 ntBASIC3.79□□□□□ -1.8
COPAP53621 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
COPAP53621 AC025034.2-201ENST00000623264 286 ntBASIC3.79□□□□□ -1.8
COPAP53621 MIR3662-201ENST00000637030 95 ntBASIC3.79□□□□□ -1.8
COPAP53621 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms