Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.39□□□□□ -2.19
GTF2A1P52655 BNIP3P2-201ENST00000441221 577 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 USP9YP10-201ENST00000454868 628 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 RPL26P9-201ENST00000457466 433 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 RPS15AP36-201ENST00000492022 382 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 MTCO1P31-201ENST00000506355 492 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 SNORA44.1-201ENST00000517031 108 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.39□□□□□ -2.19
GTF2A1P52655 CR383656.7-201ENST00000548164 174 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 RRN3P3-201ENST00000549207 578 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 AC124947.2-202ENST00000552735 133 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.39□□□□□ -2.19
GTF2A1P52655 MIR4648-201ENST00000580107 72 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.39□□□□□ -2.19
GTF2A1P52655 AL031274.2-201ENST00000599419 203 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 AC009318.2-201ENST00000610917 651 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 AC092881.1-201ENST00000638218 2733 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 OR4G11P-202ENST00000642116 1414 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 ZNF876P-202ENST00000398732 1485 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
GTF2A1P52655 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
GTF2A1P52655 Z98749.2-208ENST00000381646 500 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
GTF2A1P52655 RNU6-217P-201ENST00000384164 104 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.38□□□□□ -2.19
GTF2A1P52655 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.38□□□□□ -2.19
GTF2A1P52655 HMGN2P3-201ENST00000433603 273 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.38□□□□□ -2.19
GTF2A1P52655 HMGN2P5-201ENST00000436882 273 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 HMGB1P18-201ENST00000438801 619 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 RPL23AP16-201ENST00000441715 421 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 MTCO1P48-201ENST00000448024 1096 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.38□□□□□ -2.19
GTF2A1P52655 HMGB1P35-201ENST00000503360 598 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.38□□□□□ -2.19
GTF2A1P52655 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.38□□□□□ -2.19
GTF2A1P52655 RNU6-250P-201ENST00000516958 103 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.38□□□□□ -2.19
GTF2A1P52655 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.38□□□□□ -2.19
GTF2A1P52655 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
GTF2A1P52655 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.38□□□□□ -2.19
GTF2A1P52655 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.38□□□□□ -2.19
GTF2A1P52655 AC010889.1-201ENST00000566193 2666 ntBASIC1.38□□□□□ -2.19
GTF2A1P52655 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
GTF2A1P52655 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 MIR583-201ENST00000384846 75 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AC096649.2-201ENST00000416186 393 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 SFR1P2-201ENST00000421841 730 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AL358453.1-201ENST00000422522 250 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AC092047.1-201ENST00000424997 240 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 MED14P1-201ENST00000430517 648 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.37□□□□□ -2.19
GTF2A1P52655 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.37□□□□□ -2.19
GTF2A1P52655 PIGFP3-201ENST00000441918 722 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AC079448.1-201ENST00000449377 373 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 SSXP1-201ENST00000453640 473 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.37□□□□□ -2.19
GTF2A1P52655 AC011352.3-201ENST00000505162 593 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.37□□□□□ -2.19
GTF2A1P52655 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.37□□□□□ -2.19
GTF2A1P52655 AC024224.1-201ENST00000538284 609 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AK6P1-201ENST00000540219 478 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.37□□□□□ -2.19
GTF2A1P52655 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.37□□□□□ -2.19
GTF2A1P52655 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
GTF2A1P52655 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.37□□□□□ -2.19
GTF2A1P52655 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.37□□□□□ -2.19
GTF2A1P52655 AL138963.2-201ENST00000605137 226 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 LINC00216-201ENST00000623548 1126 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AC083865.1-201ENST00000636634 831 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AC010149.2-201ENST00000637608 315 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 AC006026.1-201ENST00000444025 1803 ntBASIC1.37□□□□□ -2.19
GTF2A1P52655 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
GTF2A1P52655 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.37□□□□□ -2.19
GTF2A1P52655 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
GTF2A1P52655 RNU6-748P-201ENST00000384648 107 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 MIR514A1-201ENST00000385133 98 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
GTF2A1P52655 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.36□□□□□ -2.19
GTF2A1P52655 BEND7P1-201ENST00000422058 457 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 BX510359.4-201ENST00000423750 193 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.36□□□□□ -2.19
GTF2A1P52655 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.36□□□□□ -2.19
GTF2A1P52655 AC104564.1-201ENST00000493028 407 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
GTF2A1P52655 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.36□□□□□ -2.19
GTF2A1P52655 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
GTF2A1P52655 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.36□□□□□ -2.19
GTF2A1P52655 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.36□□□□□ -2.19
GTF2A1P52655 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.36□□□□□ -2.19
GTF2A1P52655 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
GTF2A1P52655 DUXAP10-204ENST00000612052 616 ntBASIC1.36□□□□□ -2.19
GTF2A1P52655 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.36□□□□□ -2.19
GTF2A1P52655 U6atac.2-201ENST00000408644 118 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms