Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC012442.3-202ENST00000636742 206 ntBASIC3.16□□□□□ -1.9
CLK1P49759 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLK1P49759 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
CLK1P49759 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLK1P49759 AL356274.2-201ENST00000624379 3752 ntBASIC3.16□□□□□ -1.9
CLK1P49759 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLK1P49759 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.15□□□□□ -1.9
CLK1P49759 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CLK1P49759 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLK1P49759 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.15□□□□□ -1.9
CLK1P49759 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLK1P49759 AL161781.1-201ENST00000354277 403 ntBASIC3.15□□□□□ -1.91
CLK1P49759 RNA5SP124-201ENST00000362739 110 ntBASIC3.15□□□□□ -1.91
CLK1P49759 RNU6-637P-201ENST00000384050 107 ntBASIC3.15□□□□□ -1.91
CLK1P49759 MIR134-201ENST00000385258 73 ntBASIC3.15□□□□□ -1.91
CLK1P49759 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLK1P49759 HMGN2P35-201ENST00000412164 270 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AL139415.2-201ENST00000431968 163 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC009961.2-201ENST00000435771 251 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.15□□□□□ -1.91
CLK1P49759 HSPD1P21-201ENST00000436541 245 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.15□□□□□ -1.91
CLK1P49759 RPS15AP7-201ENST00000439294 405 ntBASIC3.15□□□□□ -1.91
CLK1P49759 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.15□□□□□ -1.91
CLK1P49759 RPL21P23-201ENST00000446654 460 ntBASIC3.15□□□□□ -1.91
CLK1P49759 GAPDHP17-201ENST00000449858 1001 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.15□□□□□ -1.91
CLK1P49759 SNORD121B-201ENST00000458838 81 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
CLK1P49759 MTAPP1-201ENST00000489154 819 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC114786.4-201ENST00000508771 728 ntBASIC3.15□□□□□ -1.91
CLK1P49759 NDUFB4P2-201ENST00000509515 391 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC104619.4-201ENST00000510773 249 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC114797.1-201ENST00000514003 728 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC093677.1-201ENST00000514414 678 ntBASIC3.15□□□□□ -1.91
CLK1P49759 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.15□□□□□ -1.91
CLK1P49759 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.15□□□□□ -1.91
CLK1P49759 SNORA18.6-201ENST00000516792 115 ntBASIC3.15□□□□□ -1.91
CLK1P49759 RNU6-1003P-201ENST00000517099 105 ntBASIC3.15□□□□□ -1.91
CLK1P49759 NRON-201ENST00000517270 370 ntBASIC3.15□□□□□ -1.91
CLK1P49759 MTCO2P4-201ENST00000517968 247 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.15□□□□□ -1.91
CLK1P49759 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.15□□□□□ -1.91
CLK1P49759 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLK1P49759 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.15□□□□□ -1.91
CLK1P49759 AC034105.3-201ENST00000565294 442 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC092325.1-201ENST00000566449 554 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC034105.4-201ENST00000568304 277 ntBASIC3.15□□□□□ -1.91
CLK1P49759 MIR3616-201ENST00000584070 92 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.15□□□□□ -1.91
CLK1P49759 AL109618.2-201ENST00000605527 211 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AC136475.10-201ENST00000620253 385 ntBASIC3.15□□□□□ -1.91
CLK1P49759 AL157786.1-207ENST00000627771 695 ntBASIC3.15□□□□□ -1.91
CLK1P49759 LRRC77P-213ENST00000637727 880 ntBASIC3.15□□□□□ -1.91
CLK1P49759 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.15□□□□□ -1.91
CLK1P49759 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.15□□□□□ -1.91
CLK1P49759 DDX10P1-201ENST00000448545 1933 ntBASIC3.15□□□□□ -1.91
CLK1P49759 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
CLK1P49759 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.14□□□□□ -1.91
CLK1P49759 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLK1P49759 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.14□□□□□ -1.91
CLK1P49759 FRG1CP-201ENST00000358464 769 ntBASIC3.14□□□□□ -1.91
CLK1P49759 RNU6-97P-201ENST00000363387 104 ntBASIC3.14□□□□□ -1.91
CLK1P49759 SNORA62.3-201ENST00000365110 153 ntBASIC3.14□□□□□ -1.91
CLK1P49759 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.14□□□□□ -1.91
CLK1P49759 MIR218-2-201ENST00000385006 110 ntBASIC3.14□□□□□ -1.91
CLK1P49759 AL356968.1-201ENST00000416622 474 ntBASIC3.14□□□□□ -1.91
CLK1P49759 C1DP2-201ENST00000418167 426 ntBASIC3.14□□□□□ -1.91
CLK1P49759 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.14□□□□□ -1.91
CLK1P49759 ISCA1P1-201ENST00000426679 387 ntBASIC3.14□□□□□ -1.91
CLK1P49759 ZNF863P-201ENST00000426746 417 ntBASIC3.14□□□□□ -1.91
CLK1P49759 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.14□□□□□ -1.91
CLK1P49759 AL596276.1-201ENST00000434465 418 ntBASIC3.14□□□□□ -1.91
CLK1P49759 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.14□□□□□ -1.91
CLK1P49759 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.14□□□□□ -1.91
CLK1P49759 MTCO3P38-201ENST00000468910 766 ntBASIC3.14□□□□□ -1.91
CLK1P49759 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.14□□□□□ -1.91
CLK1P49759 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.14□□□□□ -1.91
CLK1P49759 MRPS36P2-201ENST00000512569 299 ntBASIC3.14□□□□□ -1.91
CLK1P49759 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.14□□□□□ -1.91
CLK1P49759 AP003467.2-201ENST00000520175 319 ntBASIC3.14□□□□□ -1.91
CLK1P49759 AC022634.1-201ENST00000520765 532 ntBASIC3.14□□□□□ -1.91
CLK1P49759 DEFB108A-201ENST00000530110 222 ntBASIC3.14□□□□□ -1.91
CLK1P49759 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.14□□□□□ -1.91
CLK1P49759 GLYCAM1-201ENST00000546596 285 ntBASIC3.14□□□□□ -1.91
CLK1P49759 RPL21P5-201ENST00000554662 472 ntBASIC3.14□□□□□ -1.91
CLK1P49759 ZNF519P2-201ENST00000557032 169 ntBASIC3.14□□□□□ -1.91
CLK1P49759 OR1M4P-201ENST00000589199 287 ntBASIC3.14□□□□□ -1.91
CLK1P49759 HMGN1P30-201ENST00000589286 268 ntBASIC3.14□□□□□ -1.91
CLK1P49759 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.14□□□□□ -1.91
CLK1P49759 AC092954.2-201ENST00000609103 430 ntBASIC3.14□□□□□ -1.91
CLK1P49759 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.14□□□□□ -1.91
CLK1P49759 AC138649.3-201ENST00000622154 254 ntBASIC3.14□□□□□ -1.91
CLK1P49759 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CLK1P49759 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.14□□□□□ -1.91
CLK1P49759 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLK1P49759 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLK1P49759 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLK1P49759 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CLK1P49759 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms