Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 ZNF826P-207ENST00000622273 1910 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NKX2-1P43699 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NKX2-1P43699 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 RNU6-1167P-201ENST00000363227 94 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 Y_RNA.402-201ENST00000383972 102 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 RNU6-701P-201ENST00000384059 107 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 Y_RNA.450-201ENST00000384198 113 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 RNU6-39P-201ENST00000384344 107 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 RNU6-456P-201ENST00000384493 107 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 RNU6-14P-201ENST00000384630 106 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 AL353193.1-201ENST00000421444 268 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 MTCYBP5-201ENST00000423752 1135 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 ZNF863P-201ENST00000426746 417 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.86□□□□□ -1.95
NKX2-1P43699 RPL23AP22-201ENST00000437556 453 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 HIGD1AP11-201ENST00000438361 280 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-1P43699 HMGB3P11-201ENST00000440127 604 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.86□□□□□ -1.95
NKX2-1P43699 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-1P43699 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-1P43699 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-1P43699 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.86□□□□□ -1.95
NKX2-1P43699 RNU6-261P-201ENST00000459506 102 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 KC877373.1-201ENST00000479066 408 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 MTAPP1-201ENST00000489154 819 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 AC117522.1-201ENST00000509821 380 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 SCARNA14-201ENST00000516903 136 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 RNU6-711P-201ENST00000517255 106 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-1P43699 CYCSP30-201ENST00000546447 172 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-1P43699 AC025678.1-201ENST00000567861 338 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 SNORA59B-202ENST00000578183 701 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 MIR4775-201ENST00000581168 75 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.86□□□□□ -1.95
NKX2-1P43699 AC136601.2-201ENST00000604356 474 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 RBM11P1-201ENST00000604951 799 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 AL356321.1-201ENST00000621360 228 ntBASIC2.86□□□□□ -1.95
NKX2-1P43699 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.86□□□□□ -1.95
NKX2-1P43699 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.86□□□□□ -1.95
NKX2-1P43699 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NKX2-1P43699 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NKX2-1P43699 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.86□□□□□ -1.95
NKX2-1P43699 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-1P43699 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-1P43699 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-1P43699 ZNF680P1-201ENST00000436625 1469 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 MAPK10-362ENST00000641864 4484 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-1P43699 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NKX2-1P43699 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-1P43699 MIR372-201ENST00000362225 67 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 Y_RNA.245-201ENST00000364493 95 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 SNORA14A-201ENST00000364773 135 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 RNU6-213P-201ENST00000384051 104 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AL590002.1-201ENST00000406554 418 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 MIR548F1-201ENST00000408667 84 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC126124.2-201ENST00000413542 321 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC017079.2-201ENST00000416102 485 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.85□□□□□ -1.95
NKX2-1P43699 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 AL591419.1-201ENST00000427423 339 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 ELOCP14-201ENST00000428070 331 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC007919.1-201ENST00000429380 217 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 MTATP6P16-201ENST00000434543 526 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 ELOCP7-201ENST00000439968 331 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 MTCO3P18-201ENST00000440206 761 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 PRDX3P3-201ENST00000447765 522 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX2-1P43699 RN7SL132P-201ENST00000478131 296 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 RN7SL323P-201ENST00000494712 295 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC116562.3-201ENST00000506136 177 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 APOOP4-201ENST00000513530 597 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 SNORA40.12-201ENST00000516329 111 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 HMGB1P41-201ENST00000520234 440 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC104027.1-201ENST00000521887 300 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC068587.5-201ENST00000528506 175 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 OR4R1P-201ENST00000529879 463 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 MIR4286-201ENST00000580651 93 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 ZYXP1-201ENST00000617638 118 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC139792.3-201ENST00000623525 224 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AP003122.6-201ENST00000623831 495 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-1P43699 MIR3688-2-201ENST00000636963 87 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms