Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL159987.2-201ENST00000432754 307 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 MTATP6P30-201ENST00000443540 664 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.47□□□□□ -1.85
PTPN9P43378 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.47□□□□□ -1.85
PTPN9P43378 AC006539.3-201ENST00000454258 129 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 HMGN2P16-201ENST00000456802 261 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.47□□□□□ -1.85
PTPN9P43378 AC008155.2-201ENST00000464337 397 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.47□□□□□ -1.85
PTPN9P43378 AL117351.2-201ENST00000513571 157 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 RNU6-1178P-201ENST00000516674 107 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.47□□□□□ -1.85
PTPN9P43378 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.47□□□□□ -1.85
PTPN9P43378 OR5AQ1P-201ENST00000527596 927 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.47□□□□□ -1.85
PTPN9P43378 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.47□□□□□ -1.85
PTPN9P43378 AC055876.1-202ENST00000567053 138 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 AC005951.2-201ENST00000576282 495 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.47□□□□□ -1.85
PTPN9P43378 MIR4444-1-201ENST00000581696 74 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 MIR4444-2-201ENST00000584390 74 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 AC025449.1-201ENST00000603896 529 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 MIR6075-201ENST00000620782 95 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 AC007998.5-201ENST00000622938 237 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 AC139792.3-201ENST00000623525 224 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.47□□□□□ -1.85
PTPN9P43378 SNORA50A-202ENST00000629536 136 ntBASIC3.47□□□□□ -1.85
PTPN9P43378 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
PTPN9P43378 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTPN9P43378 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PTPN9P43378 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.47□□□□□ -1.85
PTPN9P43378 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTPN9P43378 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTPN9P43378 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.85
PTPN9P43378 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
PTPN9P43378 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTPN9P43378 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.46□□□□□ -1.86
PTPN9P43378 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.46□□□□□ -1.86
PTPN9P43378 ELF2P3-201ENST00000445099 1506 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AL079305.1-201ENST00000623159 3008 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AC008568.2-201ENST00000623862 2313 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 RNU4-48P-201ENST00000365559 182 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 Y_RNA.554-201ENST00000384672 102 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 MIR183-201ENST00000384958 110 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 MIR1-2-201ENST00000384961 85 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 MIR670-201ENST00000390142 98 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AL590002.1-201ENST00000406554 418 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AL353193.1-201ENST00000421444 268 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.46□□□□□ -1.86
PTPN9P43378 RPL31P12-201ENST00000422587 358 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 MTCYBP5-201ENST00000423752 1135 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.46□□□□□ -1.86
PTPN9P43378 AC000111.3-201ENST00000433478 193 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.46□□□□□ -1.86
PTPN9P43378 AC027673.1-201ENST00000456245 405 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AP002884.2-201ENST00000471647 395 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AC116562.3-201ENST00000506136 177 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AF213884.2-201ENST00000510417 903 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 RNU1-61P-201ENST00000516107 151 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 RNU6-927P-201ENST00000516199 100 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.46□□□□□ -1.86
PTPN9P43378 AP006587.4-201ENST00000526053 529 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AP001646.1-201ENST00000527936 915 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AC068587.5-201ENST00000528506 175 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AC104383.1-201ENST00000530297 370 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.46□□□□□ -1.86
PTPN9P43378 MIR4276-201ENST00000584832 70 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.46□□□□□ -1.86
PTPN9P43378 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.46□□□□□ -1.86
PTPN9P43378 AL121992.2-201ENST00000606262 256 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 uc_338.11-201ENST00000619132 160 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.46□□□□□ -1.86
PTPN9P43378 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
PTPN9P43378 Z83843.1-201ENST00000604070 3685 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 ZNF680P1-201ENST00000436625 1469 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.46□□□□□ -1.86
PTPN9P43378 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PTPN9P43378 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.46□□□□□ -1.86
PTPN9P43378 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN9P43378 AC090740.1-201ENST00000623193 2262 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 RNY4P14-201ENST00000363656 96 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 SMIM11P1-201ENST00000369586 178 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 RNU6-641P-201ENST00000384006 107 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 MIR7-3-201ENST00000384898 110 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 RNU6-817P-201ENST00000391083 104 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 MIR548F1-201ENST00000408667 84 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 RNA5SP229-201ENST00000410809 99 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 RN7SKP140-201ENST00000411196 284 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 RNU6-387P-201ENST00000411331 105 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 OR51A5P-201ENST00000415429 942 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.45□□□□□ -1.86
PTPN9P43378 MTATP6P16-201ENST00000434543 526 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN9P43378 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN9P43378 Z99127.3-201ENST00000448158 395 ntBASIC3.45□□□□□ -1.86
PTPN9P43378 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN9P43378 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms