Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNU7-63P-201ENST00000459054 62 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 RNU7-170P-201ENST00000459303 61 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC105417.1-201ENST00000514691 285 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 MTND4LP26-201ENST00000518144 282 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC1P41238 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC104383.1-201ENST00000530297 370 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC034105.3-201ENST00000565294 442 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 AC025678.1-201ENST00000567861 338 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 MIR3158-1-201ENST00000583596 81 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 uc_338.11-201ENST00000619132 160 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.1□□□□□ -1.91
APOBEC1P41238 MTND5P42-201ENST00000637720 498 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC007785.2-201ENST00000598627 1916 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 AC093908.1-201ENST00000623125 8092 ntBASIC3.1□□□□□ -1.91
APOBEC1P41238 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APOBEC1P41238 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APOBEC1P41238 ELF2P3-201ENST00000445099 1506 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 RNU6-288P-201ENST00000363690 104 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 RNU4-12P-201ENST00000365233 139 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 RNU6-61P-201ENST00000365528 109 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 SNORD17-201ENST00000390930 237 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBEC1P41238 AC068050.1-201ENST00000394891 380 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 CIR1P3-201ENST00000405137 479 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 RNU2-33P-201ENST00000410344 192 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC1P41238 AC126124.2-201ENST00000413542 321 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC1P41238 AL109913.1-201ENST00000421173 514 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 HMGN2P31-201ENST00000432430 273 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC1P41238 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APOBEC1P41238 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC1P41238 AC025518.1-201ENST00000479856 347 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AP002812.1-201ENST00000495378 474 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC1P41238 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC1P41238 AC011352.1-201ENST00000512300 793 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 SNORA67.7-201ENST00000516664 135 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBEC1P41238 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.09□□□□□ -1.91
APOBEC1P41238 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.09□□□□□ -1.91
APOBEC1P41238 TRAV28-201ENST00000557548 323 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.09□□□□□ -1.91
APOBEC1P41238 MIR4775-201ENST00000581168 75 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 MTATP6P3-201ENST00000581686 676 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.09□□□□□ -1.91
APOBEC1P41238 AC245389.1-201ENST00000605141 529 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AP001596.2-201ENST00000608410 312 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AC107294.1-201ENST00000609524 467 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AC009570.1-201ENST00000609599 745 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AL359547.2-201ENST00000615810 418 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AC006133.1-201ENST00000617106 264 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 AL160394.1-201ENST00000624765 724 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 MTND1P37-201ENST00000636562 264 ntBASIC3.09□□□□□ -1.91
APOBEC1P41238 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBEC1P41238 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
APOBEC1P41238 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOBEC1P41238 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBEC1P41238 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBEC1P41238 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.08□□□□□ -1.92
APOBEC1P41238 AL049781.1-201ENST00000623195 3585 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 UBE2L2-201ENST00000254302 429 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 RNU4-35P-201ENST00000362588 141 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 RNU6-1167P-201ENST00000363227 94 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 RNA5SP50-201ENST00000363731 107 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOBEC1P41238 RNU6-55P-201ENST00000411092 107 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 RNU6-954P-201ENST00000411355 107 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 Z99755.1-201ENST00000414048 380 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.08□□□□□ -1.92
APOBEC1P41238 RPL23AP82-202ENST00000427528 469 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 AL606489.2-201ENST00000433886 234 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 AC092573.2-201ENST00000434546 243 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 SNRPEP4-201ENST00000435815 279 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 PIGFP3-201ENST00000441918 722 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.08□□□□□ -1.92
APOBEC1P41238 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.08□□□□□ -1.92
APOBEC1P41238 RNA5SP310-201ENST00000459084 116 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 SNORA84-201ENST00000459229 133 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 CENPBD1P1-201ENST00000464061 469 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 FTH1P2-201ENST00000466086 412 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 RPL36AP51-201ENST00000487216 318 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 RPL39P36-201ENST00000490784 156 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 Y_RNA.689-201ENST00000516589 107 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 RNA5SP503-201ENST00000517047 117 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 IGKV2-26-201ENST00000518305 343 ntBASIC3.08□□□□□ -1.92
APOBEC1P41238 NDUFB9P3-201ENST00000521269 501 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms