Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC116447.1-201ENST00000613153 453 ntBASIC5.26□□□□□ -1.57
RXRBP28702 AC138627.2-201ENST00000624202 601 ntBASIC5.26□□□□□ -1.57
RXRBP28702 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RXRBP28702 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RXRBP28702 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RXRBP28702 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.26□□□□□ -1.57
RXRBP28702 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RXRBP28702 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RXRBP28702 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RXRBP28702 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RXRBP28702 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RXRBP28702 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RXRBP28702 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RXRBP28702 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RXRBP28702 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RXRBP28702 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RXRBP28702 RNU6-61P-201ENST00000365528 109 ntBASIC5.25□□□□□ -1.57
RXRBP28702 MIR92A2-201ENST00000385299 75 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AL391417.1-201ENST00000404100 426 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC114491.1-201ENST00000416095 246 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AL358472.1-201ENST00000431295 329 ntBASIC5.25□□□□□ -1.57
RXRBP28702 RPL7P52-201ENST00000449200 742 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AL445433.1-201ENST00000457507 257 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.25□□□□□ -1.57
RXRBP28702 RPL21P10-201ENST00000463521 490 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AP000942.1-201ENST00000463969 747 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC008155.2-201ENST00000464337 397 ntBASIC5.25□□□□□ -1.57
RXRBP28702 RPL29P14-201ENST00000495837 428 ntBASIC5.25□□□□□ -1.57
RXRBP28702 VN1R104P-201ENST00000505115 1009 ntBASIC5.25□□□□□ -1.57
RXRBP28702 RNU6-470P-201ENST00000515954 104 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC023157.2-201ENST00000540596 141 ntBASIC5.25□□□□□ -1.57
RXRBP28702 RPL23AP97-201ENST00000568955 471 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.25□□□□□ -1.57
RXRBP28702 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.25□□□□□ -1.57
RXRBP28702 AC136601.2-201ENST00000604356 474 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC012603.1-201ENST00000606424 528 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC009229.3-201ENST00000608056 282 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC010378.1-201ENST00000619270 362 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC006386.2-201ENST00000624491 75 ntBASIC5.25□□□□□ -1.57
RXRBP28702 AC012005.1-201ENST00000624575 75 ntBASIC5.25□□□□□ -1.57
RXRBP28702 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.25□□□□□ -1.57
RXRBP28702 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.25□□□□□ -1.57
RXRBP28702 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RXRBP28702 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RXRBP28702 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RXRBP28702 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
RXRBP28702 RNU6-450P-201ENST00000364654 107 ntBASIC5.24□□□□□ -1.57
RXRBP28702 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RXRBP28702 SNORA24.1-201ENST00000384401 135 ntBASIC5.24□□□□□ -1.57
RXRBP28702 Y_RNA.576-201ENST00000384781 102 ntBASIC5.24□□□□□ -1.57
RXRBP28702 SNORD66.1-201ENST00000391230 76 ntBASIC5.24□□□□□ -1.57
RXRBP28702 NDUFS5P1-201ENST00000405668 289 ntBASIC5.24□□□□□ -1.57
RXRBP28702 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RXRBP28702 RPL36AP10-201ENST00000421785 322 ntBASIC5.24□□□□□ -1.57
RXRBP28702 COTL1P1-201ENST00000422309 375 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC099336.2-201ENST00000422457 254 ntBASIC5.24□□□□□ -1.57
RXRBP28702 RPL7P46-201ENST00000425129 740 ntBASIC5.24□□□□□ -1.57
RXRBP28702 UBE2V1P13-201ENST00000436983 439 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.24□□□□□ -1.57
RXRBP28702 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.24□□□□□ -1.57
RXRBP28702 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.24□□□□□ -1.57
RXRBP28702 AC108059.3-201ENST00000456388 214 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC099560.2-201ENST00000457554 255 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.24□□□□□ -1.57
RXRBP28702 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.24□□□□□ -1.57
RXRBP28702 AC092451.1-201ENST00000480211 153 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC116337.1-201ENST00000509680 687 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.24□□□□□ -1.57
RXRBP28702 RNU6-120P-201ENST00000516077 103 ntBASIC5.24□□□□□ -1.57
RXRBP28702 RNU2-10P-201ENST00000516375 211 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC090615.1-201ENST00000577519 154 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC018462.2-201ENST00000605375 395 ntBASIC5.24□□□□□ -1.57
RXRBP28702 MIR432-201ENST00000606207 94 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC025034.2-201ENST00000623264 286 ntBASIC5.24□□□□□ -1.57
RXRBP28702 SAGE4P-201ENST00000442271 3381 ntBASIC5.24□□□□□ -1.57
RXRBP28702 MAPK10-286ENST00000641208 8747 ntBASIC5.24□□□□□ -1.57
RXRBP28702 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.24□□□□□ -1.57
RXRBP28702 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.24□□□□□ -1.57
RXRBP28702 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.24□□□□□ -1.57
RXRBP28702 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RXRBP28702 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RXRBP28702 AC011978.2-201ENST00000569835 2054 ntBASIC5.24□□□□□ -1.57
RXRBP28702 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.23□□□□□ -1.57
RXRBP28702 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 AC091812.1-201ENST00000432235 1948 ntBASIC5.23□□□□□ -1.57
RXRBP28702 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 RNU6-874P-201ENST00000362390 105 ntBASIC5.23□□□□□ -1.57
RXRBP28702 RNU6-490P-201ENST00000362985 107 ntBASIC5.23□□□□□ -1.57
RXRBP28702 RNU6-179P-201ENST00000363350 107 ntBASIC5.23□□□□□ -1.57
RXRBP28702 RNU1-115P-201ENST00000365329 160 ntBASIC5.23□□□□□ -1.57
RXRBP28702 RNA5SP151-201ENST00000365632 117 ntBASIC5.23□□□□□ -1.57
RXRBP28702 Y_RNA.389-201ENST00000383924 113 ntBASIC5.23□□□□□ -1.57
RXRBP28702 Y_RNA.485-201ENST00000384395 102 ntBASIC5.23□□□□□ -1.57
RXRBP28702 Y_RNA.552-201ENST00000384665 112 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms