Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
BDNFP23560 MIR147B-201ENST00000390185 80 ntBASIC3.29□□□□□ -1.88
BDNFP23560 TAS2R15P-201ENST00000390674 928 ntBASIC3.29□□□□□ -1.88
BDNFP23560 SNORD67-201ENST00000390833 111 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AL139397.2-201ENST00000404529 772 ntBASIC3.29□□□□□ -1.88
BDNFP23560 RPS12P24-201ENST00000412619 387 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.29□□□□□ -1.88
BDNFP23560 SDCBPP3-201ENST00000419629 891 ntBASIC3.29□□□□□ -1.88
BDNFP23560 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.29□□□□□ -1.88
BDNFP23560 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.29□□□□□ -1.88
BDNFP23560 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AL365184.2-201ENST00000431139 435 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.29□□□□□ -1.88
BDNFP23560 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.29□□□□□ -1.88
BDNFP23560 ISCA1P2-201ENST00000438679 421 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AL161651.1-201ENST00000440882 223 ntBASIC3.29□□□□□ -1.88
BDNFP23560 BRK1P2-201ENST00000442875 223 ntBASIC3.29□□□□□ -1.88
BDNFP23560 GDI2P2-201ENST00000445131 608 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.29□□□□□ -1.88
BDNFP23560 AIG1P1-201ENST00000503376 148 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AC008716.1-201ENST00000511084 513 ntBASIC3.29□□□□□ -1.88
BDNFP23560 SCARNA20.6-201ENST00000517251 106 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.29□□□□□ -1.88
BDNFP23560 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.29□□□□□ -1.88
BDNFP23560 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.29□□□□□ -1.88
BDNFP23560 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.29□□□□□ -1.88
BDNFP23560 MIR4782-201ENST00000577987 79 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BDNFP23560 AC090616.3-201ENST00000582184 217 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.29□□□□□ -1.88
BDNFP23560 AL358072.1-201ENST00000604156 575 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AP000787.2-201ENST00000604432 568 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AC007619.2-201ENST00000605743 379 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AL627309.6-201ENST00000606857 840 ntBASIC3.29□□□□□ -1.88
BDNFP23560 BX664608.1-201ENST00000610519 487 ntBASIC3.29□□□□□ -1.88
BDNFP23560 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.29□□□□□ -1.88
BDNFP23560 ATP5A1P2-202ENST00000616464 443 ntBASIC3.29□□□□□ -1.88
BDNFP23560 AC006338.1-201ENST00000618453 749 ntBASIC3.29□□□□□ -1.88
BDNFP23560 U6.99-201ENST00000637524 83 ntBASIC3.29□□□□□ -1.88
BDNFP23560 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.29□□□□□ -1.88
BDNFP23560 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
BDNFP23560 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BDNFP23560 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BDNFP23560 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.28□□□□□ -1.88
BDNFP23560 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.28□□□□□ -1.88
BDNFP23560 RNU6-19P-201ENST00000384718 107 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AL138885.1-201ENST00000405921 675 ntBASIC3.28□□□□□ -1.88
BDNFP23560 FCF1P10-201ENST00000407590 479 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.28□□□□□ -1.88
BDNFP23560 AL139281.1-201ENST00000422120 335 ntBASIC3.28□□□□□ -1.88
BDNFP23560 MTND2P9-201ENST00000422293 931 ntBASIC3.28□□□□□ -1.88
BDNFP23560 MTND4P20-201ENST00000424125 869 ntBASIC3.28□□□□□ -1.88
BDNFP23560 MICF-203ENST00000432679 129 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AL512286.1-201ENST00000439244 400 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.28□□□□□ -1.88
BDNFP23560 MTND5P2-201ENST00000442927 1142 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AC104389.3-201ENST00000445629 235 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.28□□□□□ -1.88
BDNFP23560 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.28□□□□□ -1.88
BDNFP23560 S100A11P2-201ENST00000467589 312 ntBASIC3.28□□□□□ -1.88
BDNFP23560 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.28□□□□□ -1.88
BDNFP23560 MTND1P3-201ENST00000484956 952 ntBASIC3.28□□□□□ -1.88
BDNFP23560 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.28□□□□□ -1.88
BDNFP23560 RNU7-51P-201ENST00000516560 62 ntBASIC3.28□□□□□ -1.88
BDNFP23560 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
BDNFP23560 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.28□□□□□ -1.88
BDNFP23560 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.28□□□□□ -1.88
BDNFP23560 AC006199.1-201ENST00000548728 219 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AL451007.1-201ENST00000595491 289 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AC007363.1-201ENST00000604736 620 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AL589743.7-201ENST00000612637 233 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AL356266.1-201ENST00000623311 483 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.28□□□□□ -1.88
BDNFP23560 AC073476.4-201ENST00000628409 72 ntBASIC3.28□□□□□ -1.88
BDNFP23560 MTND5P42-201ENST00000637720 498 ntBASIC3.28□□□□□ -1.88
BDNFP23560 MIR622-201ENST00000638396 96 ntBASIC3.28□□□□□ -1.88
BDNFP23560 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.28□□□□□ -1.89
BDNFP23560 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.89
BDNFP23560 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
BDNFP23560 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.27□□□□□ -1.89
BDNFP23560 AL445523.1-201ENST00000451184 1362 ntBASIC3.27□□□□□ -1.89
BDNFP23560 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BDNFP23560 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
BDNFP23560 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
BDNFP23560 RNU6-511P-201ENST00000363496 107 ntBASIC3.27□□□□□ -1.89
BDNFP23560 SNORA38-201ENST00000363946 132 ntBASIC3.27□□□□□ -1.89
BDNFP23560 RNU6-960P-201ENST00000364056 120 ntBASIC3.27□□□□□ -1.89
BDNFP23560 SNORA54-201ENST00000384281 123 ntBASIC3.27□□□□□ -1.89
BDNFP23560 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.27□□□□□ -1.89
BDNFP23560 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.27□□□□□ -1.89
BDNFP23560 PTGES3P4-201ENST00000426243 356 ntBASIC3.27□□□□□ -1.89
BDNFP23560 AC119618.1-201ENST00000434191 222 ntBASIC3.27□□□□□ -1.89
BDNFP23560 RPL36AP6-201ENST00000435770 321 ntBASIC3.27□□□□□ -1.89
BDNFP23560 HMGB3P12-201ENST00000438745 556 ntBASIC3.27□□□□□ -1.89
BDNFP23560 AC003071.1-201ENST00000451219 789 ntBASIC3.27□□□□□ -1.89
BDNFP23560 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.27□□□□□ -1.89
BDNFP23560 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.27□□□□□ -1.89
BDNFP23560 AC009812.2-201ENST00000517657 457 ntBASIC3.27□□□□□ -1.89
BDNFP23560 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
BDNFP23560 EEF1A1P37-201ENST00000522748 715 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms