Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RPL29P29-201ENST00000448725 423 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 RNU7-167P-201ENST00000459160 62 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.05□□□□□ -1.6
LMNB1P20700 AC104164.2-201ENST00000496953 495 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
LMNB1P20700 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.05□□□□□ -1.6
LMNB1P20700 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.05□□□□□ -1.6
LMNB1P20700 SNORA14.1-201ENST00000516113 141 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 RNU6-1069P-201ENST00000516612 133 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.05□□□□□ -1.6
LMNB1P20700 IGKV2D-19-201ENST00000523346 262 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.05□□□□□ -1.6
LMNB1P20700 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.05□□□□□ -1.6
LMNB1P20700 MTCO3P23-201ENST00000561363 289 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.05□□□□□ -1.6
LMNB1P20700 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.05□□□□□ -1.6
LMNB1P20700 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 CYP2C61P-201ENST00000604072 290 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.05□□□□□ -1.6
LMNB1P20700 FP236240.3-201ENST00000623061 327 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AC007546.2-201ENST00000623996 360 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 AL669831.3-213ENST00000636676 183 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.05□□□□□ -1.6
LMNB1P20700 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LMNB1P20700 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LMNB1P20700 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMNB1P20700 AL079305.1-201ENST00000623159 3008 ntBASIC5.05□□□□□ -1.6
LMNB1P20700 MTND5P10-201ENST00000603719 1809 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMNB1P20700 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
LMNB1P20700 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMNB1P20700 Y_RNA.5-201ENST00000362334 102 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMNB1P20700 Y_RNA.473-201ENST00000384333 102 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 RNU6-393P-201ENST00000384475 107 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 RNU6-1105P-201ENST00000384774 107 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 MIR218-2-201ENST00000385006 110 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 SNORD96B-201ENST00000386148 79 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 RPL21P17-201ENST00000397467 475 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 AL583834.1-201ENST00000406943 343 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 RNA5SP111-201ENST00000411386 101 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 RPLP0P7-201ENST00000416050 667 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 AL358176.2-201ENST00000425769 204 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 RPL7P28-201ENST00000437739 740 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 RPL21P23-201ENST00000446654 460 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 AC022795.1-201ENST00000473808 480 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 RN7SL323P-201ENST00000494712 295 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.04□□□□□ -1.6
LMNB1P20700 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.04□□□□□ -1.6
LMNB1P20700 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.04□□□□□ -1.6
LMNB1P20700 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.04□□□□□ -1.6
LMNB1P20700 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.04□□□□□ -1.6
LMNB1P20700 AC006064.5-201ENST00000541782 248 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.04□□□□□ -1.6
LMNB1P20700 AL355836.1-201ENST00000555951 870 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.04□□□□□ -1.6
LMNB1P20700 MIR5690-201ENST00000583739 73 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 Z98200.1-201ENST00000607298 470 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 U2.17-201ENST00000611454 95 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 AC140113.4-201ENST00000622087 222 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 AL353748.2-201ENST00000622148 471 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMNB1P20700 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMNB1P20700 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMNB1P20700 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.04□□□□□ -1.6
LMNB1P20700 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMNB1P20700 KPNA2P1-201ENST00000458289 1591 ntBASIC5.04□□□□□ -1.6
LMNB1P20700 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMNB1P20700 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.03□□□□□ -1.6
LMNB1P20700 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMNB1P20700 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMNB1P20700 RNU6-1115P-201ENST00000362490 106 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 RNU2-43P-201ENST00000410306 190 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 Z74021.1-201ENST00000423610 407 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 ABCF2P2-201ENST00000450549 296 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMNB1P20700 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.03□□□□□ -1.6
LMNB1P20700 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMNB1P20700 AC009901.1-201ENST00000506703 541 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 AC079140.5-201ENST00000507882 310 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 RN7SKP60-201ENST00000516985 239 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 SNORA31.22-201ENST00000517204 135 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.03□□□□□ -1.6
LMNB1P20700 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.03□□□□□ -1.6
LMNB1P20700 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.03□□□□□ -1.6
LMNB1P20700 AC107016.1-201ENST00000550463 337 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 AC005951.2-201ENST00000576282 495 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.03□□□□□ -1.6
LMNB1P20700 XIAPP1-201ENST00000603162 600 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 AC106900.2-201ENST00000604994 317 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 AL157817.1-201ENST00000614264 790 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 AC010205.1-201ENST00000616668 449 ntBASIC5.03□□□□□ -1.6
LMNB1P20700 AC005086.4-201ENST00000623065 213 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms