Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RPS29P20-201ENST00000489592 171 ntBASIC2.35□□□□□ -2.03
NCK1P16333 SCARNA17.1-201ENST00000516211 143 ntBASIC2.35□□□□□ -2.03
NCK1P16333 SCARNA17.2-201ENST00000516334 143 ntBASIC2.35□□□□□ -2.03
NCK1P16333 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
NCK1P16333 RNU6-703P-201ENST00000516946 107 ntBASIC2.35□□□□□ -2.03
NCK1P16333 AC087276.1-201ENST00000529659 480 ntBASIC2.35□□□□□ -2.03
NCK1P16333 AP004247.1-201ENST00000531556 1289 ntBASIC2.35□□□□□ -2.03
NCK1P16333 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.35□□□□□ -2.03
NCK1P16333 AC243972.3-201ENST00000539655 198 ntBASIC2.35□□□□□ -2.03
NCK1P16333 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.35□□□□□ -2.03
NCK1P16333 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.35□□□□□ -2.03
NCK1P16333 MIR4293-201ENST00000584305 78 ntBASIC2.35□□□□□ -2.03
NCK1P16333 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NCK1P16333 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.35□□□□□ -2.03
NCK1P16333 SCARNA17.4-201ENST00000614296 143 ntBASIC2.35□□□□□ -2.03
NCK1P16333 MIR8057-201ENST00000620957 69 ntBASIC2.35□□□□□ -2.03
NCK1P16333 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.35□□□□□ -2.03
NCK1P16333 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.35□□□□□ -2.03
NCK1P16333 SCARNA15.3-201ENST00000626315 122 ntBASIC2.35□□□□□ -2.03
NCK1P16333 SCARNA4.1-201ENST00000628597 123 ntBASIC2.35□□□□□ -2.03
NCK1P16333 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.35□□□□□ -2.03
NCK1P16333 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.35□□□□□ -2.03
NCK1P16333 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
NCK1P16333 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
NCK1P16333 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NCK1P16333 RPL21P132-201ENST00000331267 462 ntBASIC2.34□□□□□ -2.03
NCK1P16333 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
NCK1P16333 RNU6-433P-201ENST00000363216 104 ntBASIC2.34□□□□□ -2.03
NCK1P16333 RNU5A-8P-201ENST00000364102 114 ntBASIC2.34□□□□□ -2.03
NCK1P16333 RNA5SP88-201ENST00000365560 109 ntBASIC2.34□□□□□ -2.03
NCK1P16333 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.34□□□□□ -2.03
NCK1P16333 RNU6-278P-201ENST00000390945 109 ntBASIC2.34□□□□□ -2.03
NCK1P16333 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.34□□□□□ -2.03
NCK1P16333 AL021407.1-201ENST00000404531 386 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.34□□□□□ -2.03
NCK1P16333 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
NCK1P16333 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.34□□□□□ -2.03
NCK1P16333 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.34□□□□□ -2.03
NCK1P16333 LARP1BP3-201ENST00000437229 869 ntBASIC2.34□□□□□ -2.03
NCK1P16333 SDR42E1P3-201ENST00000438345 502 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.34□□□□□ -2.03
NCK1P16333 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.34□□□□□ -2.03
NCK1P16333 USP9YP25-201ENST00000457708 443 ntBASIC2.34□□□□□ -2.03
NCK1P16333 RPL37P6-201ENST00000460682 294 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AP000852.1-201ENST00000472460 573 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AC105252.1-201ENST00000503089 286 ntBASIC2.34□□□□□ -2.03
NCK1P16333 RPF2P2-201ENST00000504693 896 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.34□□□□□ -2.03
NCK1P16333 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.34□□□□□ -2.03
NCK1P16333 MTCYBP43-201ENST00000513621 740 ntBASIC2.34□□□□□ -2.03
NCK1P16333 RNU5A-4P-201ENST00000516588 111 ntBASIC2.34□□□□□ -2.03
NCK1P16333 DEFB108A-201ENST00000530110 222 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AC023050.2-201ENST00000544968 387 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NCK1P16333 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.34□□□□□ -2.03
NCK1P16333 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.34□□□□□ -2.03
NCK1P16333 AC023824.2-201ENST00000566185 400 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.34□□□□□ -2.03
NCK1P16333 MIR544B-201ENST00000582372 78 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AC098826.3-201ENST00000603823 466 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AP002791.1-201ENST00000623291 381 ntBASIC2.34□□□□□ -2.03
NCK1P16333 AC112204.3-201ENST00000623822 332 ntBASIC2.34□□□□□ -2.03
NCK1P16333 MIR7157-201ENST00000635801 60 ntBASIC2.34□□□□□ -2.03
NCK1P16333 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
NCK1P16333 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NCK1P16333 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
NCK1P16333 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NCK1P16333 AC092125.1-201ENST00000562568 1995 ntBASIC2.33□□□□□ -2.04
NCK1P16333 ZNF29P-201ENST00000225587 168 ntBASIC2.33□□□□□ -2.04
NCK1P16333 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NCK1P16333 RNU1-140P-201ENST00000365040 165 ntBASIC2.33□□□□□ -2.04
NCK1P16333 AL139397.2-201ENST00000404529 772 ntBASIC2.33□□□□□ -2.04
NCK1P16333 RNU2-49P-201ENST00000410666 184 ntBASIC2.33□□□□□ -2.04
NCK1P16333 MTCO2P23-201ENST00000425216 680 ntBASIC2.33□□□□□ -2.04
NCK1P16333 MTND1P32-201ENST00000433043 938 ntBASIC2.33□□□□□ -2.04
NCK1P16333 CR769767.1-201ENST00000436337 346 ntBASIC2.33□□□□□ -2.04
NCK1P16333 AL117351.1-201ENST00000438864 766 ntBASIC2.33□□□□□ -2.04
NCK1P16333 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.33□□□□□ -2.04
NCK1P16333 RPS24P13-201ENST00000442520 397 ntBASIC2.33□□□□□ -2.04
NCK1P16333 MTATP6P30-201ENST00000443540 664 ntBASIC2.33□□□□□ -2.04
NCK1P16333 AC104389.3-201ENST00000445629 235 ntBASIC2.33□□□□□ -2.04
NCK1P16333 AC009961.3-201ENST00000449832 765 ntBASIC2.33□□□□□ -2.04
NCK1P16333 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.33□□□□□ -2.04
NCK1P16333 CECR9-201ENST00000453421 199 ntBASIC2.33□□□□□ -2.04
NCK1P16333 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.33□□□□□ -2.04
NCK1P16333 AC128713.1-201ENST00000471495 306 ntBASIC2.33□□□□□ -2.04
NCK1P16333 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.33□□□□□ -2.04
NCK1P16333 EIF4EP3-201ENST00000498782 656 ntBASIC2.33□□□□□ -2.04
NCK1P16333 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NCK1P16333 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.33□□□□□ -2.04
NCK1P16333 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
NCK1P16333 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NCK1P16333 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.33□□□□□ -2.04
NCK1P16333 RNU6-64P-201ENST00000517119 105 ntBASIC2.33□□□□□ -2.04
NCK1P16333 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NCK1P16333 OR5BN1P-201ENST00000532955 829 ntBASIC2.33□□□□□ -2.04
NCK1P16333 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.33□□□□□ -2.04
NCK1P16333 AC061975.8-201ENST00000587058 721 ntBASIC2.33□□□□□ -2.04
NCK1P16333 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.33□□□□□ -2.04
NCK1P16333 AC068057.2-201ENST00000624047 895 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms