Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL645568.3-201ENST00000433683 316 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 HIGD1AP11-201ENST00000438361 280 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 RPS29P33-201ENST00000456717 146 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 MTND5P16-201ENST00000460269 1703 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 AC026782.1-201ENST00000512952 449 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 APOOP4-201ENST00000513530 597 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.25□□□□□ -1.73
COL6A2P12110 SNRPGP16-201ENST00000533275 226 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
COL6A2P12110 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.25□□□□□ -1.73
COL6A2P12110 MIR4270-201ENST00000581799 70 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 AL161616.1-201ENST00000611867 286 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 OR56B2P-202ENST00000641377 2453 ntBASIC4.25□□□□□ -1.73
COL6A2P12110 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL6A2P12110 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL6A2P12110 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL6A2P12110 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL6A2P12110 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.25□□□□□ -1.73
COL6A2P12110 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.25□□□□□ -1.73
COL6A2P12110 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
COL6A2P12110 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
COL6A2P12110 OR5P1P-201ENST00000299512 925 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL6A2P12110 DEFB108F-201ENST00000344638 222 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.24□□□□□ -1.73
COL6A2P12110 Y_RNA.5-201ENST00000362334 102 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 RNU6-173P-201ENST00000364215 104 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 RNA5SP235-201ENST00000365411 114 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 SNORA75B-201ENST00000384053 137 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 RNU6-95P-201ENST00000384697 107 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 MIR1179-201ENST00000408703 91 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL6A2P12110 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.24□□□□□ -1.73
COL6A2P12110 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.24□□□□□ -1.73
COL6A2P12110 AL035666.1-201ENST00000446195 348 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.24□□□□□ -1.73
COL6A2P12110 RPL23AP81-201ENST00000455252 467 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 HMGB3P30-201ENST00000457863 606 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
COL6A2P12110 RN7SL738P-201ENST00000470264 297 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 HMGB1P22-201ENST00000505315 124 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
COL6A2P12110 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.24□□□□□ -1.73
COL6A2P12110 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL6A2P12110 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.24□□□□□ -1.73
COL6A2P12110 Y_RNA.708-201ENST00000516950 96 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 RNU1-54P-201ENST00000517181 120 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 AP004371.1-201ENST00000525240 214 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.24□□□□□ -1.73
COL6A2P12110 AC084783.1-201ENST00000565846 910 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 FAM60BP-201ENST00000578364 658 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 AC018462.2-201ENST00000605375 395 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 uc_338.13-201ENST00000618243 179 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL6A2P12110 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL6A2P12110 FAM35DP-201ENST00000323387 2712 ntBASIC4.24□□□□□ -1.73
COL6A2P12110 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.24□□□□□ -1.73
COL6A2P12110 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL6A2P12110 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL6A2P12110 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
COL6A2P12110 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL6A2P12110 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL6A2P12110 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
COL6A2P12110 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL6A2P12110 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL6A2P12110 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
COL6A2P12110 RNU6-1115P-201ENST00000362490 106 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 SNORD62.1-201ENST00000362541 86 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 RNU6-266P-201ENST00000364225 107 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 RNVU1-6-201ENST00000364688 164 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 RNU6-308P-201ENST00000390957 107 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 RNU6-1050P-201ENST00000410388 107 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.23□□□□□ -1.73
COL6A2P12110 RPL21P90-201ENST00000415692 466 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.23□□□□□ -1.73
COL6A2P12110 AL590632.1-201ENST00000424289 371 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AC079780.1-201ENST00000428259 207 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.23□□□□□ -1.73
COL6A2P12110 RPL21P23-201ENST00000446654 460 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.23□□□□□ -1.73
COL6A2P12110 AL360271.2-201ENST00000447710 161 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 SNORD5.1-201ENST00000458800 75 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 RNU7-138P-201ENST00000459479 64 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AC026979.1-201ENST00000492525 396 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.23□□□□□ -1.73
COL6A2P12110 AC096745.1-201ENST00000509945 370 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.23□□□□□ -1.73
COL6A2P12110 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.23□□□□□ -1.73
COL6A2P12110 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 Vault.1-201ENST00000516474 102 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 RNA5SP73-201ENST00000516744 108 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 RNU6-1213P-201ENST00000517075 94 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 SNORA31.20-201ENST00000517111 133 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AC087369.1-201ENST00000520775 996 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AP006289.1-201ENST00000538089 277 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.23□□□□□ -1.73
COL6A2P12110 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.23□□□□□ -1.73
COL6A2P12110 AC107016.1-201ENST00000550463 337 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms