Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-64P-201ENST00000517119 105 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.25□□□□□ -1.73
SNRPA1P09661 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.25□□□□□ -1.73
SNRPA1P09661 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.25□□□□□ -1.73
SNRPA1P09661 OR8L1P-201ENST00000534005 955 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 HIGD1AP1-201ENST00000550979 275 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.25□□□□□ -1.73
SNRPA1P09661 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.25□□□□□ -1.73
SNRPA1P09661 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.25□□□□□ -1.73
SNRPA1P09661 AL136221.1-201ENST00000621449 509 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC090617.10-201ENST00000624308 134 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 USP8P1-201ENST00000494673 3183 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 AC006026.1-201ENST00000444025 1803 ntBASIC4.25□□□□□ -1.73
SNRPA1P09661 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SNRPA1P09661 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.25□□□□□ -1.73
SNRPA1P09661 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNRPA1P09661 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.25□□□□□ -1.73
SNRPA1P09661 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.24□□□□□ -1.73
SNRPA1P09661 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.24□□□□□ -1.73
SNRPA1P09661 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.24□□□□□ -1.73
SNRPA1P09661 SNORA62.1-201ENST00000364287 154 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 RNU4-76P-201ENST00000364509 141 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNRPA1P09661 RNU6-1011P-201ENST00000384668 107 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 MIR454-201ENST00000390180 115 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 SNORD37.1-201ENST00000390968 65 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 RNU2-36P-201ENST00000410361 191 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 RNU6-516P-201ENST00000411381 104 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AC007390.1-201ENST00000415722 356 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.24□□□□□ -1.73
SNRPA1P09661 AL353678.1-201ENST00000422735 741 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AC018630.2-202ENST00000422992 927 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 MED13P1-201ENST00000428342 171 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.24□□□□□ -1.73
SNRPA1P09661 snoU109.4-201ENST00000458953 143 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 GMFBP1-201ENST00000467831 427 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.24□□□□□ -1.73
SNRPA1P09661 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.24□□□□□ -1.73
SNRPA1P09661 NIPA2P2-201ENST00000496376 1083 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AC135721.1-201ENST00000497954 479 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 VWA8P1-201ENST00000510889 176 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.24□□□□□ -1.73
SNRPA1P09661 RNU7-51P-201ENST00000516560 62 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 NARSP2-201ENST00000518524 679 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.24□□□□□ -1.73
SNRPA1P09661 AP003385.6-201ENST00000531603 374 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 CR383656.7-201ENST00000548164 174 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.24□□□□□ -1.73
SNRPA1P09661 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.24□□□□□ -1.73
SNRPA1P09661 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.24□□□□□ -1.73
SNRPA1P09661 MIR4795-201ENST00000584182 89 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.24□□□□□ -1.73
SNRPA1P09661 AL355812.1-201ENST00000603215 216 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.24□□□□□ -1.73
SNRPA1P09661 AC009233.1-201ENST00000616477 371 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.24□□□□□ -1.73
SNRPA1P09661 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNRPA1P09661 AC027287.1-201ENST00000553115 1453 ntBASIC4.24□□□□□ -1.73
SNRPA1P09661 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNRPA1P09661 RPS4XP5-202ENST00000449995 1334 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 ASNSP3-201ENST00000451989 1306 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNRPA1P09661 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNRPA1P09661 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SNRPA1P09661 AL353743.1-202ENST00000431724 1695 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNRPA1P09661 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNRPA1P09661 MTCO1P9-201ENST00000505577 1534 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SNRPA1P09661 HSPE1P11-201ENST00000339579 310 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 SNORA32.2-201ENST00000384049 122 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 RNU6-432P-201ENST00000384196 109 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 AL356432.1-201ENST00000405809 419 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 MIR1250-201ENST00000408098 113 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 RNA5SP107-201ENST00000411358 122 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 OR2AS1P-201ENST00000427827 319 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.23□□□□□ -1.73
SNRPA1P09661 RPL23AP67-201ENST00000465341 474 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 S100A11P2-201ENST00000467589 312 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 RPL7P23-201ENST00000493874 747 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 RPL38P4-201ENST00000502376 214 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 AC004062.1-201ENST00000509926 645 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 FTH1P9-201ENST00000513251 355 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 RNU2-10P-201ENST00000516375 211 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 SCARNA13-201ENST00000516672 275 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.23□□□□□ -1.73
SNRPA1P09661 FAM60DP-201ENST00000524174 632 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 OR5BN1P-201ENST00000532955 829 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.23□□□□□ -1.73
SNRPA1P09661 AC004024.1-201ENST00000549244 247 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.23□□□□□ -1.73
SNRPA1P09661 AC106782.4-201ENST00000568264 210 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 MIR4738-201ENST00000579134 87 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 AC013553.2-201ENST00000604244 589 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 AL031176.1-201ENST00000604554 466 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 AC244205.2-202ENST00000635781 342 ntBASIC4.23□□□□□ -1.73
SNRPA1P09661 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNRPA1P09661 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNRPA1P09661 MTND5P3-201ENST00000438536 1800 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms