Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.53□□□□□ -2
HOXC4P09017 MIR3611-201ENST00000584484 83 ntBASIC2.53□□□□□ -2
HOXC4P09017 MIR548AB-201ENST00000584917 84 ntBASIC2.53□□□□□ -2
HOXC4P09017 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.53□□□□□ -2
HOXC4P09017 AC068790.6-201ENST00000602558 258 ntBASIC2.53□□□□□ -2
HOXC4P09017 AL596327.1-201ENST00000603629 213 ntBASIC2.53□□□□□ -2
HOXC4P09017 AL031176.1-201ENST00000604554 466 ntBASIC2.53□□□□□ -2
HOXC4P09017 MIR7844-201ENST00000616161 122 ntBASIC2.53□□□□□ -2
HOXC4P09017 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.53□□□□□ -2
HOXC4P09017 AC231657.1-201ENST00000624313 397 ntBASIC2.53□□□□□ -2
HOXC4P09017 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.53□□□□□ -2
HOXC4P09017 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.53□□□□□ -2
HOXC4P09017 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.53□□□□□ -2
HOXC4P09017 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC4P09017 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC4P09017 RNU6-777P-201ENST00000364265 104 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC4P09017 SNORD21-201ENST00000383953 95 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 MTCO3P41-201ENST00000414801 328 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 BX682237.1-201ENST00000415016 335 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 RPL23AP39-201ENST00000415533 405 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 BEND7P1-201ENST00000422058 457 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AL953862.1-201ENST00000423016 168 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 MED14P1-201ENST00000430517 648 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 MTND4P6-201ENST00000438297 472 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC092427.1-201ENST00000439177 601 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AL512286.1-201ENST00000439244 400 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 UBBP3-201ENST00000445497 241 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 Z96811.1-201ENST00000445880 108 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 COX6CP12-201ENST00000446748 202 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC4P09017 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC4P09017 AC027673.1-201ENST00000456245 405 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXC4P09017 COX7A2P2-201ENST00000505291 250 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC079140.3-201ENST00000511111 550 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXC4P09017 AC006499.2-201ENST00000513470 337 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXC4P09017 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXC4P09017 RPL7P20-201ENST00000520308 745 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC4P09017 AC100870.1-201ENST00000522035 505 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXC4P09017 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXC4P09017 CR383656.7-201ENST00000548164 174 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXC4P09017 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
HOXC4P09017 MIR3921-201ENST00000577308 85 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXC4P09017 GLUD1P4-201ENST00000590914 418 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC078795.2-201ENST00000602835 1252 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 AC010678.1-201ENST00000614118 713 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 U6.101-201ENST00000637707 76 ntBASIC2.52□□□□□ -2.01
HOXC4P09017 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
HOXC4P09017 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HOXC4P09017 AL161431.1-201ENST00000618966 4205 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HOXC4P09017 DEFB108F-201ENST00000344638 222 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 RNA5SP139-201ENST00000364340 117 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 RNU6-723P-201ENST00000383973 107 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 RNA5SP252-201ENST00000391131 119 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 MTCYBP36-201ENST00000404146 440 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 MIR1290-201ENST00000408735 78 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC4P09017 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC4P09017 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC4P09017 ZYG11AP1-201ENST00000430329 837 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AL365184.2-201ENST00000431139 435 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AL031667.1-201ENST00000440222 725 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 RAC1P7-201ENST00000445367 377 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 RPL39P6-201ENST00000448289 150 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC4P09017 AP000705.1-201ENST00000454567 350 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AL031183.1-201ENST00000457667 207 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 RNU6-956P-201ENST00000458868 103 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AC128713.1-201ENST00000471495 306 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.51□□□□□ -2.01
HOXC4P09017 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC4P09017 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC4P09017 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC4P09017 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC4P09017 RN7SKP24-201ENST00000515888 284 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 RNU6-150P-201ENST00000516237 95 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC4P09017 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC4P09017 DEFB108D-201ENST00000527787 222 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AP002963.1-201ENST00000530590 184 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXC4P09017 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC4P09017 AP002770.2-201ENST00000543613 532 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms