Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RMST_7.1-201ENST00000621935 268 ntBASIC4.57□□□□□ -1.68
APPP05067 AC009812.4-201ENST00000569134 1805 ntBASIC4.57□□□□□ -1.68
APPP05067 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
APPP05067 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.57□□□□□ -1.68
APPP05067 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
APPP05067 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
APPP05067 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
APPP05067 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
APPP05067 RNU6-1287P-201ENST00000362914 107 ntBASIC4.56□□□□□ -1.68
APPP05067 RNU6-288P-201ENST00000363690 104 ntBASIC4.56□□□□□ -1.68
APPP05067 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
APPP05067 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.56□□□□□ -1.68
APPP05067 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APPP05067 Y_RNA.419-201ENST00000384041 102 ntBASIC4.56□□□□□ -1.68
APPP05067 RNU6-1060P-201ENST00000384664 107 ntBASIC4.56□□□□□ -1.68
APPP05067 MIR554-201ENST00000384874 96 ntBASIC4.56□□□□□ -1.68
APPP05067 SNORA57.3-201ENST00000411095 141 ntBASIC4.56□□□□□ -1.68
APPP05067 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.56□□□□□ -1.68
APPP05067 MTCO1P39-201ENST00000426148 480 ntBASIC4.56□□□□□ -1.68
APPP05067 MTATP6P4-201ENST00000427725 675 ntBASIC4.56□□□□□ -1.68
APPP05067 AC010285.1-201ENST00000470580 392 ntBASIC4.56□□□□□ -1.68
APPP05067 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.56□□□□□ -1.68
APPP05067 RPS27AP1-201ENST00000475545 471 ntBASIC4.56□□□□□ -1.68
APPP05067 RN7SL432P-201ENST00000484057 298 ntBASIC4.56□□□□□ -1.68
APPP05067 HMGB1P22-201ENST00000505315 124 ntBASIC4.56□□□□□ -1.68
APPP05067 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.56□□□□□ -1.68
APPP05067 RNU6-277P-201ENST00000516272 106 ntBASIC4.56□□□□□ -1.68
APPP05067 RNA5SP164-201ENST00000516533 110 ntBASIC4.56□□□□□ -1.68
APPP05067 Y_RNA.689-201ENST00000516589 107 ntBASIC4.56□□□□□ -1.68
APPP05067 RNU6-273P-201ENST00000516937 96 ntBASIC4.56□□□□□ -1.68
APPP05067 AP001804.3-201ENST00000525146 880 ntBASIC4.56□□□□□ -1.68
APPP05067 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.56□□□□□ -1.68
APPP05067 AL121576.1-201ENST00000556055 276 ntBASIC4.56□□□□□ -1.68
APPP05067 AC034105.4-201ENST00000568304 277 ntBASIC4.56□□□□□ -1.68
APPP05067 MIR3942-201ENST00000585264 109 ntBASIC4.56□□□□□ -1.68
APPP05067 AC006130.2-201ENST00000586202 326 ntBASIC4.56□□□□□ -1.68
APPP05067 SNRPGP15-201ENST00000600149 222 ntBASIC4.56□□□□□ -1.68
APPP05067 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.56□□□□□ -1.68
APPP05067 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.56□□□□□ -1.68
APPP05067 AC092807.2-201ENST00000609367 243 ntBASIC4.56□□□□□ -1.68
APPP05067 AC010133.1-201ENST00000615809 842 ntBASIC4.56□□□□□ -1.68
APPP05067 uc_338.34-201ENST00000617467 174 ntBASIC4.56□□□□□ -1.68
APPP05067 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.56□□□□□ -1.68
APPP05067 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.56□□□□□ -1.68
APPP05067 TPTEP1-208ENST00000636884 213 ntBASIC4.56□□□□□ -1.68
APPP05067 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
APPP05067 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APPP05067 MFSD8-236ENST00000641509 4050 ntBASIC4.56□□□□□ -1.68
APPP05067 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.56□□□□□ -1.68
APPP05067 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
APPP05067 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APPP05067 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APPP05067 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APPP05067 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.55□□□□□ -1.68
APPP05067 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APPP05067 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APPP05067 RNU2-29P-201ENST00000410423 189 ntBASIC4.55□□□□□ -1.68
APPP05067 MTCO3P46-201ENST00000425787 232 ntBASIC4.55□□□□□ -1.68
APPP05067 AL591419.1-201ENST00000427423 339 ntBASIC4.55□□□□□ -1.68
APPP05067 AL445584.1-201ENST00000431451 330 ntBASIC4.55□□□□□ -1.68
APPP05067 IFNA20P-201ENST00000436840 528 ntBASIC4.55□□□□□ -1.68
APPP05067 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.55□□□□□ -1.68
APPP05067 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.55□□□□□ -1.68
APPP05067 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.55□□□□□ -1.68
APPP05067 SNRPFP3-201ENST00000457792 225 ntBASIC4.55□□□□□ -1.68
APPP05067 RNU7-66P-201ENST00000459469 62 ntBASIC4.55□□□□□ -1.68
APPP05067 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.55□□□□□ -1.68
APPP05067 AC018630.1-201ENST00000541376 925 ntBASIC4.55□□□□□ -1.68
APPP05067 AC093012.1-202ENST00000549403 582 ntBASIC4.55□□□□□ -1.68
APPP05067 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.55□□□□□ -1.68
APPP05067 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.55□□□□□ -1.68
APPP05067 PSMA3P-201ENST00000555485 635 ntBASIC4.55□□□□□ -1.68
APPP05067 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.55□□□□□ -1.68
APPP05067 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.55□□□□□ -1.68
APPP05067 AC087499.8-201ENST00000578406 226 ntBASIC4.55□□□□□ -1.68
APPP05067 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.55□□□□□ -1.68
APPP05067 AC243960.4-201ENST00000600532 288 ntBASIC4.55□□□□□ -1.68
APPP05067 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.55□□□□□ -1.68
APPP05067 AC008162.1-201ENST00000604718 254 ntBASIC4.55□□□□□ -1.68
APPP05067 AL670379.4-201ENST00000605279 254 ntBASIC4.55□□□□□ -1.68
APPP05067 AC012409.4-201ENST00000612923 249 ntBASIC4.55□□□□□ -1.68
APPP05067 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.55□□□□□ -1.68
APPP05067 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APPP05067 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.55□□□□□ -1.68
APPP05067 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
APPP05067 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APPP05067 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APPP05067 Y_RNA.67-201ENST00000362870 100 ntBASIC4.54□□□□□ -1.68
APPP05067 SNORA36C-201ENST00000384289 132 ntBASIC4.54□□□□□ -1.68
APPP05067 MT-TD-201ENST00000387419 68 ntBASIC4.54□□□□□ -1.68
APPP05067 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APPP05067 MTHFD2P2-201ENST00000407725 247 ntBASIC4.54□□□□□ -1.68
APPP05067 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.54□□□□□ -1.68
APPP05067 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.54□□□□□ -1.68
APPP05067 NEFMP1-201ENST00000443423 1006 ntBASIC4.54□□□□□ -1.68
APPP05067 HMGN2P21-201ENST00000447764 270 ntBASIC4.54□□□□□ -1.68
APPP05067 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.54□□□□□ -1.68
APPP05067 RNU6-329P-201ENST00000459618 107 ntBASIC4.54□□□□□ -1.68
APPP05067 RN7SL542P-201ENST00000467147 294 ntBASIC4.54□□□□□ -1.68
APPP05067 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms